Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19■□□□□ 0.63
CISHQ9NSE2 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19■□□□□ 0.63
CISHQ9NSE2 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19■□□□□ 0.63
CISHQ9NSE2 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19■□□□□ 0.63
CISHQ9NSE2 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19■□□□□ 0.63
CISHQ9NSE2 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19■□□□□ 0.63
CISHQ9NSE2 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19■□□□□ 0.63
CISHQ9NSE2 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19■□□□□ 0.63
CISHQ9NSE2 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CISHQ9NSE2 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CISHQ9NSE2 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CISHQ9NSE2 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CISHQ9NSE2 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19■□□□□ 0.63
CISHQ9NSE2 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19■□□□□ 0.63
CISHQ9NSE2 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CISHQ9NSE2 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CISHQ9NSE2 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CISHQ9NSE2 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CISHQ9NSE2 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CISHQ9NSE2 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CISHQ9NSE2 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
CISHQ9NSE2 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CISHQ9NSE2 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CISHQ9NSE2 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CISHQ9NSE2 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CISHQ9NSE2 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.99■□□□□ 0.63
CISHQ9NSE2 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CISHQ9NSE2 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CISHQ9NSE2 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CISHQ9NSE2 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CISHQ9NSE2 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CISHQ9NSE2 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CISHQ9NSE2 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CISHQ9NSE2 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.99■□□□□ 0.63
CISHQ9NSE2 IGHV3-47-201ENST00000425060 335 ntBASIC18.99■□□□□ 0.63
CISHQ9NSE2 AC007967.3-201ENST00000434308 558 ntBASIC18.99■□□□□ 0.63
CISHQ9NSE2 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.99■□□□□ 0.63
CISHQ9NSE2 AC074051.2-201ENST00000565115 352 ntBASIC18.99■□□□□ 0.63
CISHQ9NSE2 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CISHQ9NSE2 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.99■□□□□ 0.63
CISHQ9NSE2 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CISHQ9NSE2 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.99■□□□□ 0.63
CISHQ9NSE2 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CISHQ9NSE2 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CISHQ9NSE2 NSUN5P1-202ENST00000421140 1535 ntBASIC18.99■□□□□ 0.63
CISHQ9NSE2 NSUN5P2-203ENST00000457352 1529 ntBASIC18.99■□□□□ 0.63
CISHQ9NSE2 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CISHQ9NSE2 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CISHQ9NSE2 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.99■□□□□ 0.63
CISHQ9NSE2 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CISHQ9NSE2 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CISHQ9NSE2 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CISHQ9NSE2 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CISHQ9NSE2 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CISHQ9NSE2 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.98■□□□□ 0.63
CISHQ9NSE2 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CISHQ9NSE2 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CISHQ9NSE2 HCG4P8-203ENST00000443049 980 ntBASIC18.98■□□□□ 0.63
CISHQ9NSE2 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.98■□□□□ 0.63
CISHQ9NSE2 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.98■□□□□ 0.63
CISHQ9NSE2 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.98■□□□□ 0.63
CISHQ9NSE2 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.98■□□□□ 0.63
CISHQ9NSE2 AC012615.1-201ENST00000565797 1299 ntBASIC18.98■□□□□ 0.63
CISHQ9NSE2 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.98■□□□□ 0.63
CISHQ9NSE2 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.98■□□□□ 0.63
CISHQ9NSE2 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.98■□□□□ 0.63
CISHQ9NSE2 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CISHQ9NSE2 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.98■□□□□ 0.63
CISHQ9NSE2 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CISHQ9NSE2 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CISHQ9NSE2 BCL2-203ENST00000589955 5011 ntBASIC18.97■□□□□ 0.63
CISHQ9NSE2 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
CISHQ9NSE2 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.97■□□□□ 0.63
CISHQ9NSE2 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CISHQ9NSE2 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.97■□□□□ 0.63
CISHQ9NSE2 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.97■□□□□ 0.63
CISHQ9NSE2 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.97■□□□□ 0.63
CISHQ9NSE2 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CISHQ9NSE2 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.97■□□□□ 0.63
CISHQ9NSE2 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CISHQ9NSE2 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CISHQ9NSE2 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CISHQ9NSE2 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CISHQ9NSE2 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CISHQ9NSE2 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CISHQ9NSE2 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.97■□□□□ 0.63
CISHQ9NSE2 BX276092.7-203ENST00000637198 1536 ntBASIC18.97■□□□□ 0.63
CISHQ9NSE2 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
CISHQ9NSE2 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.97■□□□□ 0.63
CISHQ9NSE2 AC104819.1-201ENST00000504587 486 ntBASIC18.97■□□□□ 0.63
CISHQ9NSE2 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CISHQ9NSE2 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
CISHQ9NSE2 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.97■□□□□ 0.63
CISHQ9NSE2 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CISHQ9NSE2 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.97■□□□□ 0.63
CISHQ9NSE2 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CISHQ9NSE2 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CISHQ9NSE2 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CISHQ9NSE2 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CISHQ9NSE2 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms