Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS45Q9NRW7 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.39■□□□□ 0.53
VPS45Q9NRW7 FAM220CP-201ENST00000395253 831 ntBASIC18.39■□□□□ 0.53
VPS45Q9NRW7 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.39■□□□□ 0.53
VPS45Q9NRW7 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.39■□□□□ 0.53
VPS45Q9NRW7 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.39■□□□□ 0.53
VPS45Q9NRW7 AC093909.1-201ENST00000504731 1122 ntBASIC18.39■□□□□ 0.53
VPS45Q9NRW7 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.39■□□□□ 0.53
VPS45Q9NRW7 RNA5SP419-201ENST00000515908 135 ntBASIC18.39■□□□□ 0.53
VPS45Q9NRW7 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.39■□□□□ 0.53
VPS45Q9NRW7 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS45Q9NRW7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VPS45Q9NRW7 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS45Q9NRW7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS45Q9NRW7 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.39■□□□□ 0.53
VPS45Q9NRW7 AC090340.1-201ENST00000620778 4980 ntBASIC18.39■□□□□ 0.53
VPS45Q9NRW7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.39■□□□□ 0.53
VPS45Q9NRW7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS45Q9NRW7 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS45Q9NRW7 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.39■□□□□ 0.53
VPS45Q9NRW7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.39■□□□□ 0.53
VPS45Q9NRW7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS45Q9NRW7 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.39■□□□□ 0.53
VPS45Q9NRW7 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS45Q9NRW7 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.39■□□□□ 0.53
VPS45Q9NRW7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VPS45Q9NRW7 NSUN5P1-202ENST00000421140 1535 ntBASIC18.39■□□□□ 0.53
VPS45Q9NRW7 NSUN5P2-203ENST00000457352 1529 ntBASIC18.39■□□□□ 0.53
VPS45Q9NRW7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.38■□□□□ 0.53
VPS45Q9NRW7 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VPS45Q9NRW7 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
VPS45Q9NRW7 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.38■□□□□ 0.53
VPS45Q9NRW7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS45Q9NRW7 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.38■□□□□ 0.53
VPS45Q9NRW7 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS45Q9NRW7 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS45Q9NRW7 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS45Q9NRW7 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS45Q9NRW7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS45Q9NRW7 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS45Q9NRW7 NUS1P2-201ENST00000417358 873 ntBASIC18.38■□□□□ 0.53
VPS45Q9NRW7 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.38■□□□□ 0.53
VPS45Q9NRW7 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.38■□□□□ 0.53
VPS45Q9NRW7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS45Q9NRW7 FAM197Y8-203ENST00000450145 560 ntBASIC18.38■□□□□ 0.53
VPS45Q9NRW7 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.38■□□□□ 0.53
VPS45Q9NRW7 DUTP2-201ENST00000519164 463 ntBASIC18.38■□□□□ 0.53
VPS45Q9NRW7 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VPS45Q9NRW7 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.38■□□□□ 0.53
VPS45Q9NRW7 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.38■□□□□ 0.53
VPS45Q9NRW7 AL592071.1-201ENST00000611956 408 ntBASIC18.38■□□□□ 0.53
VPS45Q9NRW7 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
VPS45Q9NRW7 TP73-AS1-207ENST00000624167 988 ntBASIC18.38■□□□□ 0.53
VPS45Q9NRW7 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.38■□□□□ 0.53
VPS45Q9NRW7 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS45Q9NRW7 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS45Q9NRW7 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS45Q9NRW7 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS45Q9NRW7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.38■□□□□ 0.53
VPS45Q9NRW7 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS45Q9NRW7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VPS45Q9NRW7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS45Q9NRW7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS45Q9NRW7 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS45Q9NRW7 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.38■□□□□ 0.53
VPS45Q9NRW7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS45Q9NRW7 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS45Q9NRW7 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
VPS45Q9NRW7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
VPS45Q9NRW7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS45Q9NRW7 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS45Q9NRW7 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS45Q9NRW7 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
VPS45Q9NRW7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS45Q9NRW7 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS45Q9NRW7 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS45Q9NRW7 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VPS45Q9NRW7 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS45Q9NRW7 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS45Q9NRW7 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
VPS45Q9NRW7 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VPS45Q9NRW7 AL031284.1-201ENST00000419297 478 ntBASIC18.37■□□□□ 0.53
VPS45Q9NRW7 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.37■□□□□ 0.53
VPS45Q9NRW7 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VPS45Q9NRW7 SLC25A1P1-201ENST00000528351 927 ntBASIC18.37■□□□□ 0.53
VPS45Q9NRW7 AC124864.1-201ENST00000623408 392 ntBASIC18.37■□□□□ 0.53
VPS45Q9NRW7 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS45Q9NRW7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VPS45Q9NRW7 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
VPS45Q9NRW7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
VPS45Q9NRW7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.37■□□□□ 0.53
VPS45Q9NRW7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS45Q9NRW7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
VPS45Q9NRW7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS45Q9NRW7 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS45Q9NRW7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
VPS45Q9NRW7 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VPS45Q9NRW7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS45Q9NRW7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS45Q9NRW7 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms