Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TLR9Q9NR96 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.83■□□□□ 0.6
TLR9Q9NR96 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TLR9Q9NR96 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TLR9Q9NR96 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TLR9Q9NR96 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TLR9Q9NR96 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TLR9Q9NR96 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TLR9Q9NR96 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TLR9Q9NR96 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.82■□□□□ 0.6
TLR9Q9NR96 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TLR9Q9NR96 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TLR9Q9NR96 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TLR9Q9NR96 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TLR9Q9NR96 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TLR9Q9NR96 ELK2BP-201ENST00000415014 1224 ntBASIC18.82■□□□□ 0.6
TLR9Q9NR96 HTR5BP-201ENST00000430851 1154 ntBASIC18.82■□□□□ 0.6
TLR9Q9NR96 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.82■□□□□ 0.6
TLR9Q9NR96 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.82■□□□□ 0.6
TLR9Q9NR96 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TLR9Q9NR96 MIR4751-201ENST00000578027 74 ntBASIC18.82■□□□□ 0.6
TLR9Q9NR96 MIR4469-201ENST00000583919 79 ntBASIC18.82■□□□□ 0.6
TLR9Q9NR96 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.82■□□□□ 0.6
TLR9Q9NR96 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.82■□□□□ 0.6
TLR9Q9NR96 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.82■□□□□ 0.6
TLR9Q9NR96 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TLR9Q9NR96 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TLR9Q9NR96 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TLR9Q9NR96 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TLR9Q9NR96 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TLR9Q9NR96 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TLR9Q9NR96 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TLR9Q9NR96 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TLR9Q9NR96 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TLR9Q9NR96 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TLR9Q9NR96 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
TLR9Q9NR96 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TLR9Q9NR96 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TLR9Q9NR96 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.81■□□□□ 0.6
TLR9Q9NR96 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
TLR9Q9NR96 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TLR9Q9NR96 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.81■□□□□ 0.6
TLR9Q9NR96 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TLR9Q9NR96 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TLR9Q9NR96 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TLR9Q9NR96 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
TLR9Q9NR96 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TLR9Q9NR96 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.81■□□□□ 0.6
TLR9Q9NR96 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TLR9Q9NR96 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TLR9Q9NR96 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TLR9Q9NR96 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.81■□□□□ 0.6
TLR9Q9NR96 ALG1L5P-201ENST00000482043 771 ntBASIC18.81■□□□□ 0.6
TLR9Q9NR96 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.81■□□□□ 0.6
TLR9Q9NR96 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.81■□□□□ 0.6
TLR9Q9NR96 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
TLR9Q9NR96 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TLR9Q9NR96 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TLR9Q9NR96 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TLR9Q9NR96 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TLR9Q9NR96 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TLR9Q9NR96 AC006504.4-201ENST00000592118 1568 ntBASIC18.81■□□□□ 0.6
TLR9Q9NR96 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TLR9Q9NR96 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TLR9Q9NR96 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.8■□□□□ 0.6
TLR9Q9NR96 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TLR9Q9NR96 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.8■□□□□ 0.6
TLR9Q9NR96 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TLR9Q9NR96 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TLR9Q9NR96 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TLR9Q9NR96 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.8■□□□□ 0.6
TLR9Q9NR96 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TLR9Q9NR96 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TLR9Q9NR96 COX5BP2-201ENST00000392354 334 ntBASIC18.8■□□□□ 0.6
TLR9Q9NR96 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.8■□□□□ 0.6
TLR9Q9NR96 AC254562.1-201ENST00000417586 456 ntBASIC18.8■□□□□ 0.6
TLR9Q9NR96 AC108073.2-201ENST00000464002 357 ntBASIC18.8■□□□□ 0.6
TLR9Q9NR96 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.8■□□□□ 0.6
TLR9Q9NR96 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.8■□□□□ 0.6
TLR9Q9NR96 AC092865.6-201ENST00000642101 219 ntBASIC18.8■□□□□ 0.6
TLR9Q9NR96 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TLR9Q9NR96 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TLR9Q9NR96 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TLR9Q9NR96 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TLR9Q9NR96 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TLR9Q9NR96 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TLR9Q9NR96 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
TLR9Q9NR96 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.8■□□□□ 0.6
TLR9Q9NR96 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.8■□□□□ 0.6
TLR9Q9NR96 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.8■□□□□ 0.6
TLR9Q9NR96 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TLR9Q9NR96 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
TLR9Q9NR96 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TLR9Q9NR96 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.79■□□□□ 0.6
TLR9Q9NR96 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TLR9Q9NR96 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TLR9Q9NR96 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.79■□□□□ 0.6
TLR9Q9NR96 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TLR9Q9NR96 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TLR9Q9NR96 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms