Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RTN4Q9NQC3 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.06■□□□□ 0.96
RTN4Q9NQC3 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC21.06■□□□□ 0.96
RTN4Q9NQC3 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RTN4Q9NQC3 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
RTN4Q9NQC3 LINC00528-201ENST00000600723 2160 ntBASIC21.06■□□□□ 0.96
RTN4Q9NQC3 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC21.06■□□□□ 0.96
RTN4Q9NQC3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RTN4Q9NQC3 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RTN4Q9NQC3 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC21.06■□□□□ 0.96
RTN4Q9NQC3 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RTN4Q9NQC3 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RTN4Q9NQC3 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
RTN4Q9NQC3 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RTN4Q9NQC3 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.06■□□□□ 0.96
RTN4Q9NQC3 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.06■□□□□ 0.96
RTN4Q9NQC3 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RTN4Q9NQC3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.06■□□□□ 0.96
RTN4Q9NQC3 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RTN4Q9NQC3 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RTN4Q9NQC3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RTN4Q9NQC3 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
RTN4Q9NQC3 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RTN4Q9NQC3 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
RTN4Q9NQC3 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC21.05■□□□□ 0.96
RTN4Q9NQC3 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTN4Q9NQC3 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTN4Q9NQC3 LINC01837-201ENST00000590021 1320 ntTSL 5 BASIC21.05■□□□□ 0.96
RTN4Q9NQC3 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC21.05■□□□□ 0.96
RTN4Q9NQC3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RTN4Q9NQC3 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RTN4Q9NQC3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
RTN4Q9NQC3 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
RTN4Q9NQC3 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RTN4Q9NQC3 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC21.05■□□□□ 0.96
RTN4Q9NQC3 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RTN4Q9NQC3 AC083906.2-201ENST00000511578 360 ntBASIC21.05■□□□□ 0.96
RTN4Q9NQC3 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.05■□□□□ 0.96
RTN4Q9NQC3 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.05■□□□□ 0.96
RTN4Q9NQC3 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.05■□□□□ 0.96
RTN4Q9NQC3 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTN4Q9NQC3 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RTN4Q9NQC3 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTN4Q9NQC3 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC21.05■□□□□ 0.96
RTN4Q9NQC3 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.05■□□□□ 0.96
RTN4Q9NQC3 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC21.05■□□□□ 0.96
RTN4Q9NQC3 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
RTN4Q9NQC3 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC21.05■□□□□ 0.96
RTN4Q9NQC3 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTN4Q9NQC3 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
RTN4Q9NQC3 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
RTN4Q9NQC3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTN4Q9NQC3 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTN4Q9NQC3 CICP4-201ENST00000447359 2812 ntBASIC21.05■□□□□ 0.96
RTN4Q9NQC3 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC21.05■□□□□ 0.96
RTN4Q9NQC3 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RTN4Q9NQC3 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTN4Q9NQC3 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTN4Q9NQC3 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTN4Q9NQC3 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTN4Q9NQC3 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.04■□□□□ 0.96
RTN4Q9NQC3 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTN4Q9NQC3 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTN4Q9NQC3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
RTN4Q9NQC3 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTN4Q9NQC3 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
RTN4Q9NQC3 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTN4Q9NQC3 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RTN4Q9NQC3 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
RTN4Q9NQC3 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTN4Q9NQC3 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RTN4Q9NQC3 KRT18P16-201ENST00000510337 1294 ntBASIC21.04■□□□□ 0.96
RTN4Q9NQC3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.04■□□□□ 0.96
RTN4Q9NQC3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.04■□□□□ 0.96
RTN4Q9NQC3 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
RTN4Q9NQC3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.04■□□□□ 0.96
RTN4Q9NQC3 AL121906.2-201ENST00000621597 723 ntBASIC21.04■□□□□ 0.96
RTN4Q9NQC3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTN4Q9NQC3 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
RTN4Q9NQC3 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC21.04■□□□□ 0.96
RTN4Q9NQC3 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC21.04■□□□□ 0.96
RTN4Q9NQC3 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RTN4Q9NQC3 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTN4Q9NQC3 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC21.04■□□□□ 0.96
RTN4Q9NQC3 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTN4Q9NQC3 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTN4Q9NQC3 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTN4Q9NQC3 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTN4Q9NQC3 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RTN4Q9NQC3 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
RTN4Q9NQC3 FEM1AP3-201ENST00000403722 1741 ntBASIC21.04■□□□□ 0.96
RTN4Q9NQC3 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTN4Q9NQC3 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RTN4Q9NQC3 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
RTN4Q9NQC3 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RTN4Q9NQC3 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RTN4Q9NQC3 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RTN4Q9NQC3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC21.03■□□□□ 0.96
RTN4Q9NQC3 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RTN4Q9NQC3 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms