Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
EFCC1Q9HA90 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EFCC1Q9HA90 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC20.7■□□□□ 0.9
EFCC1Q9HA90 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC20.7■□□□□ 0.9
EFCC1Q9HA90 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
EFCC1Q9HA90 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
EFCC1Q9HA90 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.7■□□□□ 0.9
EFCC1Q9HA90 COX5A-206ENST00000568783 571 ntTSL 3 BASIC20.7■□□□□ 0.9
EFCC1Q9HA90 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.7■□□□□ 0.9
EFCC1Q9HA90 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EFCC1Q9HA90 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
EFCC1Q9HA90 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC20.7■□□□□ 0.9
EFCC1Q9HA90 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EFCC1Q9HA90 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
EFCC1Q9HA90 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EFCC1Q9HA90 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
EFCC1Q9HA90 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EFCC1Q9HA90 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.7■□□□□ 0.9
EFCC1Q9HA90 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EFCC1Q9HA90 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.7■□□□□ 0.9
EFCC1Q9HA90 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.7■□□□□ 0.9
EFCC1Q9HA90 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EFCC1Q9HA90 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EFCC1Q9HA90 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EFCC1Q9HA90 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
EFCC1Q9HA90 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
EFCC1Q9HA90 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
EFCC1Q9HA90 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
EFCC1Q9HA90 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.69■□□□□ 0.9
EFCC1Q9HA90 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
EFCC1Q9HA90 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.69■□□□□ 0.9
EFCC1Q9HA90 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EFCC1Q9HA90 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.69■□□□□ 0.9
EFCC1Q9HA90 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
EFCC1Q9HA90 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC20.69■□□□□ 0.9
EFCC1Q9HA90 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC20.69■□□□□ 0.9
EFCC1Q9HA90 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC20.69■□□□□ 0.9
EFCC1Q9HA90 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC20.69■□□□□ 0.9
EFCC1Q9HA90 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.69■□□□□ 0.9
EFCC1Q9HA90 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.69■□□□□ 0.9
EFCC1Q9HA90 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC20.69■□□□□ 0.9
EFCC1Q9HA90 AP002472.1-201ENST00000577490 586 ntBASIC20.69■□□□□ 0.9
EFCC1Q9HA90 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC20.69■□□□□ 0.9
EFCC1Q9HA90 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC20.69■□□□□ 0.9
EFCC1Q9HA90 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC20.69■□□□□ 0.9
EFCC1Q9HA90 AC106028.4-201ENST00000614509 607 ntBASIC20.69■□□□□ 0.9
EFCC1Q9HA90 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EFCC1Q9HA90 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
EFCC1Q9HA90 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
EFCC1Q9HA90 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
EFCC1Q9HA90 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.69■□□□□ 0.9
EFCC1Q9HA90 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.69■□□□□ 0.9
EFCC1Q9HA90 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EFCC1Q9HA90 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EFCC1Q9HA90 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EFCC1Q9HA90 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
EFCC1Q9HA90 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EFCC1Q9HA90 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EFCC1Q9HA90 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EFCC1Q9HA90 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EFCC1Q9HA90 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EFCC1Q9HA90 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EFCC1Q9HA90 CNN2P11-201ENST00000429351 262 ntBASIC20.68■□□□□ 0.9
EFCC1Q9HA90 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EFCC1Q9HA90 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC20.68■□□□□ 0.9
EFCC1Q9HA90 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.68■□□□□ 0.9
EFCC1Q9HA90 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
EFCC1Q9HA90 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.68■□□□□ 0.9
EFCC1Q9HA90 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
EFCC1Q9HA90 AC138932.1-201ENST00000534164 6830 ntBASIC20.68■□□□□ 0.9
EFCC1Q9HA90 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
EFCC1Q9HA90 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.68■□□□□ 0.9
EFCC1Q9HA90 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
EFCC1Q9HA90 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EFCC1Q9HA90 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.67■□□□□ 0.9
EFCC1Q9HA90 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
EFCC1Q9HA90 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
EFCC1Q9HA90 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EFCC1Q9HA90 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EFCC1Q9HA90 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EFCC1Q9HA90 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
EFCC1Q9HA90 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.67■□□□□ 0.9
EFCC1Q9HA90 LHX6-205ENST00000464484 666 ntTSL 2 BASIC20.67■□□□□ 0.9
EFCC1Q9HA90 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.67■□□□□ 0.9
EFCC1Q9HA90 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.67■□□□□ 0.9
EFCC1Q9HA90 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
EFCC1Q9HA90 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
EFCC1Q9HA90 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.67■□□□□ 0.9
EFCC1Q9HA90 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.67■□□□□ 0.9
EFCC1Q9HA90 MIR1199-201ENST00000621445 119 ntBASIC20.67■□□□□ 0.9
EFCC1Q9HA90 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC20.67■□□□□ 0.9
EFCC1Q9HA90 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.67■□□□□ 0.9
EFCC1Q9HA90 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EFCC1Q9HA90 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
EFCC1Q9HA90 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
EFCC1Q9HA90 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.67■□□□□ 0.9
EFCC1Q9HA90 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.67■□□□□ 0.9
EFCC1Q9HA90 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
EFCC1Q9HA90 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
EFCC1Q9HA90 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms