Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SH2D4AQ9H788 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
SH2D4AQ9H788 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SH2D4AQ9H788 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SH2D4AQ9H788 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SH2D4AQ9H788 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SH2D4AQ9H788 RPL13AP23-201ENST00000480739 586 ntBASIC20.72■□□□□ 0.91
SH2D4AQ9H788 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SH2D4AQ9H788 AL671883.3-201ENST00000603274 991 ntBASIC20.72■□□□□ 0.91
SH2D4AQ9H788 AD001527.2-201ENST00000622994 785 ntBASIC20.72■□□□□ 0.91
SH2D4AQ9H788 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.72■□□□□ 0.91
SH2D4AQ9H788 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.72■□□□□ 0.91
SH2D4AQ9H788 WIZP1-201ENST00000531444 2299 ntBASIC20.72■□□□□ 0.91
SH2D4AQ9H788 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
SH2D4AQ9H788 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.72■□□□□ 0.91
SH2D4AQ9H788 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SH2D4AQ9H788 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SH2D4AQ9H788 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.72■□□□□ 0.91
SH2D4AQ9H788 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SH2D4AQ9H788 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SH2D4AQ9H788 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SH2D4AQ9H788 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.71■□□□□ 0.91
SH2D4AQ9H788 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SH2D4AQ9H788 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SH2D4AQ9H788 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SH2D4AQ9H788 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SH2D4AQ9H788 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SH2D4AQ9H788 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SH2D4AQ9H788 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.71■□□□□ 0.91
SH2D4AQ9H788 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.71■□□□□ 0.91
SH2D4AQ9H788 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.71■□□□□ 0.91
SH2D4AQ9H788 AC008735.5-201ENST00000623544 497 ntBASIC20.71■□□□□ 0.91
SH2D4AQ9H788 AC073592.4-201ENST00000623827 446 ntBASIC20.71■□□□□ 0.91
SH2D4AQ9H788 AC107918.4-202ENST00000641623 219 ntBASIC20.71■□□□□ 0.91
SH2D4AQ9H788 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SH2D4AQ9H788 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SH2D4AQ9H788 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SH2D4AQ9H788 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SH2D4AQ9H788 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SH2D4AQ9H788 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.71■□□□□ 0.91
SH2D4AQ9H788 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.71■□□□□ 0.91
SH2D4AQ9H788 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SH2D4AQ9H788 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SH2D4AQ9H788 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SH2D4AQ9H788 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
SH2D4AQ9H788 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.7■□□□□ 0.9
SH2D4AQ9H788 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.7■□□□□ 0.9
SH2D4AQ9H788 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.7■□□□□ 0.9
SH2D4AQ9H788 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SH2D4AQ9H788 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SH2D4AQ9H788 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.7■□□□□ 0.9
SH2D4AQ9H788 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SH2D4AQ9H788 LAGE3P1-201ENST00000425356 484 ntBASIC20.7■□□□□ 0.9
SH2D4AQ9H788 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SH2D4AQ9H788 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.7■□□□□ 0.9
SH2D4AQ9H788 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SH2D4AQ9H788 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SH2D4AQ9H788 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SH2D4AQ9H788 AL022326.1-202ENST00000641533 845 ntBASIC20.7■□□□□ 0.9
SH2D4AQ9H788 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.7■□□□□ 0.9
SH2D4AQ9H788 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SH2D4AQ9H788 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SH2D4AQ9H788 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SH2D4AQ9H788 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SH2D4AQ9H788 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SH2D4AQ9H788 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SH2D4AQ9H788 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SH2D4AQ9H788 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.7■□□□□ 0.9
SH2D4AQ9H788 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SH2D4AQ9H788 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SH2D4AQ9H788 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SH2D4AQ9H788 AC093677.2-201ENST00000600169 1863 ntBASIC20.69■□□□□ 0.9
SH2D4AQ9H788 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.69■□□□□ 0.9
SH2D4AQ9H788 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.69■□□□□ 0.9
SH2D4AQ9H788 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SH2D4AQ9H788 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SH2D4AQ9H788 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SH2D4AQ9H788 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.69■□□□□ 0.9
SH2D4AQ9H788 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.69■□□□□ 0.9
SH2D4AQ9H788 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.69■□□□□ 0.9
SH2D4AQ9H788 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.69■□□□□ 0.9
SH2D4AQ9H788 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SH2D4AQ9H788 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SH2D4AQ9H788 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.69■□□□□ 0.9
SH2D4AQ9H788 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.69■□□□□ 0.9
SH2D4AQ9H788 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.69■□□□□ 0.9
SH2D4AQ9H788 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.69■□□□□ 0.9
SH2D4AQ9H788 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SH2D4AQ9H788 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.69■□□□□ 0.9
SH2D4AQ9H788 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SH2D4AQ9H788 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.69■□□□□ 0.9
SH2D4AQ9H788 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.69■□□□□ 0.9
SH2D4AQ9H788 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SH2D4AQ9H788 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SH2D4AQ9H788 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SH2D4AQ9H788 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.69■□□□□ 0.9
SH2D4AQ9H788 AC009113.1-201ENST00000570267 2443 ntBASIC20.69■□□□□ 0.9
SH2D4AQ9H788 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.69■□□□□ 0.9
SH2D4AQ9H788 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SH2D4AQ9H788 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms