Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PIF1Q9H611 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PIF1Q9H611 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PIF1Q9H611 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PIF1Q9H611 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PIF1Q9H611 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.05■□□□□ 0.32
PIF1Q9H611 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PIF1Q9H611 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.05■□□□□ 0.32
PIF1Q9H611 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.05■□□□□ 0.32
PIF1Q9H611 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.05■□□□□ 0.32
PIF1Q9H611 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.05■□□□□ 0.32
PIF1Q9H611 CA15P1-201ENST00000481698 905 ntBASIC17.05■□□□□ 0.32
PIF1Q9H611 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.05■□□□□ 0.32
PIF1Q9H611 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.05■□□□□ 0.32
PIF1Q9H611 MIR4497-201ENST00000583208 89 ntBASIC17.05■□□□□ 0.32
PIF1Q9H611 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.05■□□□□ 0.32
PIF1Q9H611 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.05■□□□□ 0.32
PIF1Q9H611 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PIF1Q9H611 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PIF1Q9H611 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.05■□□□□ 0.32
PIF1Q9H611 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PIF1Q9H611 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PIF1Q9H611 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PIF1Q9H611 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PIF1Q9H611 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.05■□□□□ 0.32
PIF1Q9H611 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PIF1Q9H611 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PIF1Q9H611 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PIF1Q9H611 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PIF1Q9H611 HOXB1-202ENST00000577092 1414 ntBASIC17.04■□□□□ 0.32
PIF1Q9H611 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.04■□□□□ 0.32
PIF1Q9H611 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.04■□□□□ 0.32
PIF1Q9H611 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PIF1Q9H611 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PIF1Q9H611 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PIF1Q9H611 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PIF1Q9H611 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PIF1Q9H611 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.04■□□□□ 0.32
PIF1Q9H611 AC008894.3-201ENST00000624324 3103 ntBASIC17.04■□□□□ 0.32
PIF1Q9H611 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.04■□□□□ 0.32
PIF1Q9H611 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PIF1Q9H611 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PIF1Q9H611 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.04■□□□□ 0.32
PIF1Q9H611 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PIF1Q9H611 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PIF1Q9H611 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PIF1Q9H611 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PIF1Q9H611 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.04■□□□□ 0.32
PIF1Q9H611 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.04■□□□□ 0.32
PIF1Q9H611 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.04■□□□□ 0.32
PIF1Q9H611 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.04■□□□□ 0.32
PIF1Q9H611 AC066615.1-201ENST00000640911 628 ntBASIC17.04■□□□□ 0.32
PIF1Q9H611 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PIF1Q9H611 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PIF1Q9H611 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.04■□□□□ 0.32
PIF1Q9H611 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
PIF1Q9H611 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.04■□□□□ 0.32
PIF1Q9H611 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.04■□□□□ 0.32
PIF1Q9H611 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PIF1Q9H611 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.04■□□□□ 0.32
PIF1Q9H611 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.04■□□□□ 0.32
PIF1Q9H611 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PIF1Q9H611 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PIF1Q9H611 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PIF1Q9H611 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PIF1Q9H611 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
PIF1Q9H611 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.04■□□□□ 0.32
PIF1Q9H611 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.04■□□□□ 0.32
PIF1Q9H611 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PIF1Q9H611 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PIF1Q9H611 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PIF1Q9H611 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PIF1Q9H611 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PIF1Q9H611 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PIF1Q9H611 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PIF1Q9H611 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PIF1Q9H611 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.03■□□□□ 0.32
PIF1Q9H611 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PIF1Q9H611 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PIF1Q9H611 AP003041.3-201ENST00000527151 707 ntBASIC17.03■□□□□ 0.32
PIF1Q9H611 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.03■□□□□ 0.32
PIF1Q9H611 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PIF1Q9H611 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.03■□□□□ 0.32
PIF1Q9H611 CR769767.2-201ENST00000622735 460 ntBASIC17.03■□□□□ 0.32
PIF1Q9H611 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.03■□□□□ 0.32
PIF1Q9H611 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PIF1Q9H611 UBALD1-205ENST00000590891 2641 ntBASIC17.03■□□□□ 0.32
PIF1Q9H611 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PIF1Q9H611 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PIF1Q9H611 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PIF1Q9H611 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PIF1Q9H611 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PIF1Q9H611 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PIF1Q9H611 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
PIF1Q9H611 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
PIF1Q9H611 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PIF1Q9H611 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PIF1Q9H611 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PIF1Q9H611 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PIF1Q9H611 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms