Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 AC011467.4-201ENST00000594891 528 ntBASIC19.38■□□□□ 0.69
HIPK3Q9H422 ANO7L1-203ENST00000602586 1720 ntBASIC19.38■□□□□ 0.69
HIPK3Q9H422 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.38■□□□□ 0.69
HIPK3Q9H422 AC018445.3-201ENST00000624177 1945 ntBASIC19.38■□□□□ 0.69
HIPK3Q9H422 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
HIPK3Q9H422 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HIPK3Q9H422 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.37■□□□□ 0.69
HIPK3Q9H422 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.37■□□□□ 0.69
HIPK3Q9H422 BX323043.1-201ENST00000641006 1765 ntBASIC19.37■□□□□ 0.69
HIPK3Q9H422 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HIPK3Q9H422 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HIPK3Q9H422 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HIPK3Q9H422 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HIPK3Q9H422 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HIPK3Q9H422 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.37■□□□□ 0.69
HIPK3Q9H422 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.37■□□□□ 0.69
HIPK3Q9H422 IGLL3P-201ENST00000412472 434 ntBASIC19.37■□□□□ 0.69
HIPK3Q9H422 WDR53-203ENST00000429115 683 ntTSL 2 BASIC19.37■□□□□ 0.69
HIPK3Q9H422 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC19.37■□□□□ 0.69
HIPK3Q9H422 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.37■□□□□ 0.69
HIPK3Q9H422 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.37■□□□□ 0.69
HIPK3Q9H422 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
HIPK3Q9H422 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.37■□□□□ 0.69
HIPK3Q9H422 AL031432.2-201ENST00000566714 459 ntBASIC19.37■□□□□ 0.69
HIPK3Q9H422 AL928711.1-201ENST00000570165 459 ntBASIC19.37■□□□□ 0.69
HIPK3Q9H422 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.37■□□□□ 0.69
HIPK3Q9H422 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.37■□□□□ 0.69
HIPK3Q9H422 AC027612.4-201ENST00000605371 583 ntBASIC19.37■□□□□ 0.69
HIPK3Q9H422 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.37■□□□□ 0.69
HIPK3Q9H422 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
HIPK3Q9H422 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HIPK3Q9H422 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HIPK3Q9H422 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HIPK3Q9H422 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HIPK3Q9H422 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
HIPK3Q9H422 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
HIPK3Q9H422 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HIPK3Q9H422 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HIPK3Q9H422 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.37■□□□□ 0.69
HIPK3Q9H422 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HIPK3Q9H422 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIPK3Q9H422 AL049757.1-201ENST00000616842 1596 ntBASIC19.36■□□□□ 0.69
HIPK3Q9H422 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIPK3Q9H422 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIPK3Q9H422 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIPK3Q9H422 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HIPK3Q9H422 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIPK3Q9H422 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIPK3Q9H422 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HIPK3Q9H422 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HIPK3Q9H422 KLF4P1-201ENST00000412782 1185 ntBASIC19.36■□□□□ 0.69
HIPK3Q9H422 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.36■□□□□ 0.69
HIPK3Q9H422 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.36■□□□□ 0.69
HIPK3Q9H422 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
HIPK3Q9H422 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.36■□□□□ 0.69
HIPK3Q9H422 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.36■□□□□ 0.69
HIPK3Q9H422 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.36■□□□□ 0.69
HIPK3Q9H422 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.36■□□□□ 0.69
HIPK3Q9H422 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.36■□□□□ 0.69
HIPK3Q9H422 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.36■□□□□ 0.69
HIPK3Q9H422 PDPK2P-202ENST00000562415 1191 ntBASIC19.36■□□□□ 0.69
HIPK3Q9H422 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.36■□□□□ 0.69
HIPK3Q9H422 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIPK3Q9H422 AC010654.1-201ENST00000615722 808 ntBASIC19.36■□□□□ 0.69
HIPK3Q9H422 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIPK3Q9H422 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIPK3Q9H422 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIPK3Q9H422 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIPK3Q9H422 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIPK3Q9H422 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.35■□□□□ 0.69
HIPK3Q9H422 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
HIPK3Q9H422 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
HIPK3Q9H422 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HIPK3Q9H422 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
HIPK3Q9H422 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HIPK3Q9H422 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.35■□□□□ 0.69
HIPK3Q9H422 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.35■□□□□ 0.69
HIPK3Q9H422 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HIPK3Q9H422 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
HIPK3Q9H422 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HIPK3Q9H422 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HIPK3Q9H422 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
HIPK3Q9H422 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.35■□□□□ 0.69
HIPK3Q9H422 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.35■□□□□ 0.69
HIPK3Q9H422 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.35■□□□□ 0.69
HIPK3Q9H422 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HIPK3Q9H422 SIGLEC30P-201ENST00000455569 941 ntBASIC19.35■□□□□ 0.69
HIPK3Q9H422 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.35■□□□□ 0.69
HIPK3Q9H422 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HIPK3Q9H422 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.35■□□□□ 0.69
HIPK3Q9H422 AC004877.2-201ENST00000623941 599 ntBASIC19.35■□□□□ 0.69
HIPK3Q9H422 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HIPK3Q9H422 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HIPK3Q9H422 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.35■□□□□ 0.69
HIPK3Q9H422 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
HIPK3Q9H422 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
HIPK3Q9H422 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HIPK3Q9H422 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.35■□□□□ 0.69
HIPK3Q9H422 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HIPK3Q9H422 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms