Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.94■□□□□ 0.46
VPS11Q9H270 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS11Q9H270 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS11Q9H270 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
VPS11Q9H270 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.94■□□□□ 0.46
VPS11Q9H270 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.94■□□□□ 0.46
VPS11Q9H270 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VPS11Q9H270 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.94■□□□□ 0.46
VPS11Q9H270 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
VPS11Q9H270 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.94■□□□□ 0.46
VPS11Q9H270 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.94■□□□□ 0.46
VPS11Q9H270 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
VPS11Q9H270 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.94■□□□□ 0.46
VPS11Q9H270 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VPS11Q9H270 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.94■□□□□ 0.46
VPS11Q9H270 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VPS11Q9H270 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.94■□□□□ 0.46
VPS11Q9H270 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.94■□□□□ 0.46
VPS11Q9H270 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS11Q9H270 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS11Q9H270 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS11Q9H270 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
VPS11Q9H270 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.94■□□□□ 0.46
VPS11Q9H270 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VPS11Q9H270 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VPS11Q9H270 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
VPS11Q9H270 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS11Q9H270 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.93■□□□□ 0.46
VPS11Q9H270 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
VPS11Q9H270 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS11Q9H270 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
VPS11Q9H270 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
VPS11Q9H270 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS11Q9H270 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS11Q9H270 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS11Q9H270 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.93■□□□□ 0.46
VPS11Q9H270 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS11Q9H270 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS11Q9H270 MIR718-201ENST00000390190 70 ntBASIC17.93■□□□□ 0.46
VPS11Q9H270 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.93■□□□□ 0.46
VPS11Q9H270 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.93■□□□□ 0.46
VPS11Q9H270 AC008550.1-201ENST00000511500 884 ntBASIC17.93■□□□□ 0.46
VPS11Q9H270 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.93■□□□□ 0.46
VPS11Q9H270 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VPS11Q9H270 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.93■□□□□ 0.46
VPS11Q9H270 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.93■□□□□ 0.46
VPS11Q9H270 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.93■□□□□ 0.46
VPS11Q9H270 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS11Q9H270 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
VPS11Q9H270 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS11Q9H270 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.93■□□□□ 0.46
VPS11Q9H270 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS11Q9H270 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS11Q9H270 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.93■□□□□ 0.46
VPS11Q9H270 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS11Q9H270 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.93■□□□□ 0.46
VPS11Q9H270 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
VPS11Q9H270 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
VPS11Q9H270 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS11Q9H270 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS11Q9H270 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VPS11Q9H270 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.93■□□□□ 0.46
VPS11Q9H270 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VPS11Q9H270 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS11Q9H270 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS11Q9H270 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS11Q9H270 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VPS11Q9H270 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VPS11Q9H270 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS11Q9H270 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.92■□□□□ 0.46
VPS11Q9H270 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS11Q9H270 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS11Q9H270 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS11Q9H270 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS11Q9H270 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.92■□□□□ 0.46
VPS11Q9H270 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VPS11Q9H270 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS11Q9H270 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS11Q9H270 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
VPS11Q9H270 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS11Q9H270 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS11Q9H270 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS11Q9H270 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.92■□□□□ 0.46
VPS11Q9H270 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS11Q9H270 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS11Q9H270 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.92■□□□□ 0.46
VPS11Q9H270 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.92■□□□□ 0.46
VPS11Q9H270 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.92■□□□□ 0.46
VPS11Q9H270 AC024243.1-201ENST00000609234 778 ntBASIC17.92■□□□□ 0.46
VPS11Q9H270 AC010653.2-201ENST00000623505 997 ntBASIC17.92■□□□□ 0.46
VPS11Q9H270 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS11Q9H270 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.92■□□□□ 0.46
VPS11Q9H270 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VPS11Q9H270 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.92■□□□□ 0.46
VPS11Q9H270 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VPS11Q9H270 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS11Q9H270 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.92■□□□□ 0.46
VPS11Q9H270 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VPS11Q9H270 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
VPS11Q9H270 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms