Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
UBE2OQ9C0C9 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.58■□□□□ 0.73
UBE2OQ9C0C9 AC079776.2-201ENST00000641154 1609 ntBASIC19.58■□□□□ 0.73
UBE2OQ9C0C9 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
UBE2OQ9C0C9 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
UBE2OQ9C0C9 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.58■□□□□ 0.73
UBE2OQ9C0C9 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
UBE2OQ9C0C9 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.58■□□□□ 0.73
UBE2OQ9C0C9 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
UBE2OQ9C0C9 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
UBE2OQ9C0C9 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
UBE2OQ9C0C9 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
UBE2OQ9C0C9 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
UBE2OQ9C0C9 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.58■□□□□ 0.72
UBE2OQ9C0C9 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.58■□□□□ 0.72
UBE2OQ9C0C9 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.58■□□□□ 0.72
UBE2OQ9C0C9 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.58■□□□□ 0.72
UBE2OQ9C0C9 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.58■□□□□ 0.72
UBE2OQ9C0C9 AC005498.2-205ENST00000593218 784 ntBASIC19.58■□□□□ 0.72
UBE2OQ9C0C9 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
UBE2OQ9C0C9 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
UBE2OQ9C0C9 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
UBE2OQ9C0C9 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
UBE2OQ9C0C9 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.58■□□□□ 0.72
UBE2OQ9C0C9 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
UBE2OQ9C0C9 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
UBE2OQ9C0C9 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.58■□□□□ 0.72
UBE2OQ9C0C9 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
UBE2OQ9C0C9 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
UBE2OQ9C0C9 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
UBE2OQ9C0C9 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBE2OQ9C0C9 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
UBE2OQ9C0C9 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.57■□□□□ 0.72
UBE2OQ9C0C9 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBE2OQ9C0C9 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
UBE2OQ9C0C9 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBE2OQ9C0C9 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBE2OQ9C0C9 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBE2OQ9C0C9 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBE2OQ9C0C9 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.57■□□□□ 0.72
UBE2OQ9C0C9 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.57■□□□□ 0.72
UBE2OQ9C0C9 VN2R19P-201ENST00000442399 1052 ntBASIC19.57■□□□□ 0.72
UBE2OQ9C0C9 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.57■□□□□ 0.72
UBE2OQ9C0C9 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.57■□□□□ 0.72
UBE2OQ9C0C9 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
UBE2OQ9C0C9 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
UBE2OQ9C0C9 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.57■□□□□ 0.72
UBE2OQ9C0C9 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.57■□□□□ 0.72
UBE2OQ9C0C9 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBE2OQ9C0C9 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.57■□□□□ 0.72
UBE2OQ9C0C9 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBE2OQ9C0C9 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBE2OQ9C0C9 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBE2OQ9C0C9 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.57■□□□□ 0.72
UBE2OQ9C0C9 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBE2OQ9C0C9 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBE2OQ9C0C9 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.56■□□□□ 0.72
UBE2OQ9C0C9 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.56■□□□□ 0.72
UBE2OQ9C0C9 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBE2OQ9C0C9 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
UBE2OQ9C0C9 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBE2OQ9C0C9 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UBE2OQ9C0C9 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UBE2OQ9C0C9 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
UBE2OQ9C0C9 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UBE2OQ9C0C9 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.56■□□□□ 0.72
UBE2OQ9C0C9 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
UBE2OQ9C0C9 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UBE2OQ9C0C9 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.56■□□□□ 0.72
UBE2OQ9C0C9 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UBE2OQ9C0C9 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.56■□□□□ 0.72
UBE2OQ9C0C9 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.56■□□□□ 0.72
UBE2OQ9C0C9 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBE2OQ9C0C9 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UBE2OQ9C0C9 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UBE2OQ9C0C9 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBE2OQ9C0C9 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBE2OQ9C0C9 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBE2OQ9C0C9 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBE2OQ9C0C9 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBE2OQ9C0C9 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
UBE2OQ9C0C9 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBE2OQ9C0C9 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBE2OQ9C0C9 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBE2OQ9C0C9 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBE2OQ9C0C9 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBE2OQ9C0C9 MIR149-201ENST00000384879 89 ntBASIC19.55■□□□□ 0.72
UBE2OQ9C0C9 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UBE2OQ9C0C9 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UBE2OQ9C0C9 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.55■□□□□ 0.72
UBE2OQ9C0C9 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.55■□□□□ 0.72
UBE2OQ9C0C9 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
UBE2OQ9C0C9 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.55■□□□□ 0.72
UBE2OQ9C0C9 AC025678.2-201ENST00000562061 970 ntBASIC19.55■□□□□ 0.72
UBE2OQ9C0C9 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UBE2OQ9C0C9 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.55■□□□□ 0.72
UBE2OQ9C0C9 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
UBE2OQ9C0C9 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.55■□□□□ 0.72
UBE2OQ9C0C9 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.54■□□□□ 0.72
UBE2OQ9C0C9 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms