Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 TSEN15P1-201ENST00000423257 515 ntBASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 BCRP1-201ENST00000444246 691 ntBASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 SIGLEC30P-201ENST00000455569 941 ntBASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 AC109322.1-201ENST00000524499 1264 ntBASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 AC096734.2-201ENST00000562054 433 ntBASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 STK25P1-201ENST00000585406 838 ntBASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 AL353135.1-201ENST00000606729 504 ntBASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 AC010654.1-201ENST00000615722 808 ntBASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 AC093512.1-201ENST00000617969 520 ntBASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 AC091812.2-201ENST00000619081 385 ntBASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 AC097637.2-201ENST00000624096 1997 ntBASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 AC009949.1-201ENST00000623048 1830 ntBASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
KRTAP4-1Q9BYQ7 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 AC018445.3-201ENST00000624177 1945 ntBASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 PNMT-202ENST00000394246 821 ntTSL 2 BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 MRPL20P1-201ENST00000400819 433 ntBASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 LINC00982-205ENST00000420957 435 ntBASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 RNF34-208ENST00000555076 593 ntTSL 3 BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 AC005498.2-205ENST00000593218 784 ntBASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
KRTAP4-1Q9BYQ7 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC9.16□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms