Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 CROCCP2-202ENST00000412962 2773 ntBASIC4.82□□□□□ -1.64
LCE3DQ9BYE3 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 CICP6-201ENST00000457191 2729 ntBASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 KRT8P3-201ENST00000519669 1449 ntBASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 HTR7P1-201ENST00000538670 1336 ntBASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 PCDHB19P-201ENST00000570871 2371 ntBASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 AP000593.1-201ENST00000393668 712 ntBASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 CNN2P6-201ENST00000439038 900 ntBASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 DBI-210ENST00000542275 757 ntTSL 5 BASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 DUX4L16-201ENST00000555130 1264 ntBASIC4.81□□□□□ -1.64
LCE3DQ9BYE3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms