Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AC005336.2-201ENST00000593183 939 ntBASIC14.87□□□□□ -0.03
SSBP3Q9BWW4 BNIP3P18-201ENST00000593976 575 ntBASIC14.87□□□□□ -0.03
SSBP3Q9BWW4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP3Q9BWW4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP3Q9BWW4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP3Q9BWW4 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC14.87□□□□□ -0.03
SSBP3Q9BWW4 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP3Q9BWW4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
SSBP3Q9BWW4 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP3Q9BWW4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC14.87□□□□□ -0.03
SSBP3Q9BWW4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC14.87□□□□□ -0.03
SSBP3Q9BWW4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC14.87□□□□□ -0.03
SSBP3Q9BWW4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP3Q9BWW4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC14.87□□□□□ -0.03
SSBP3Q9BWW4 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP3Q9BWW4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP3Q9BWW4 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP3Q9BWW4 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP3Q9BWW4 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP3Q9BWW4 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14.86□□□□□ -0.03
SSBP3Q9BWW4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP3Q9BWW4 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
SSBP3Q9BWW4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP3Q9BWW4 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP3Q9BWW4 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP3Q9BWW4 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP3Q9BWW4 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP3Q9BWW4 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP3Q9BWW4 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SSBP3Q9BWW4 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP3Q9BWW4 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.86□□□□□ -0.03
SSBP3Q9BWW4 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP3Q9BWW4 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.86□□□□□ -0.03
SSBP3Q9BWW4 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.86□□□□□ -0.03
SSBP3Q9BWW4 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.86□□□□□ -0.03
SSBP3Q9BWW4 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.86□□□□□ -0.03
SSBP3Q9BWW4 UNC93B7-201ENST00000509439 705 ntBASIC14.86□□□□□ -0.03
SSBP3Q9BWW4 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.86□□□□□ -0.03
SSBP3Q9BWW4 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.86□□□□□ -0.03
SSBP3Q9BWW4 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.86□□□□□ -0.03
SSBP3Q9BWW4 AC114341.1-201ENST00000618070 349 ntBASIC14.86□□□□□ -0.03
SSBP3Q9BWW4 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.86□□□□□ -0.03
SSBP3Q9BWW4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP3Q9BWW4 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
SSBP3Q9BWW4 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC14.86□□□□□ -0.03
SSBP3Q9BWW4 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP3Q9BWW4 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP3Q9BWW4 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC14.86□□□□□ -0.03
SSBP3Q9BWW4 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SSBP3Q9BWW4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
SSBP3Q9BWW4 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 AL096828.2-201ENST00000567259 1965 ntBASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 PODN-203ENST00000395871 2744 ntTSL 5 BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SSBP3Q9BWW4 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms