Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
RPAP1Q9BWH6 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RPAP1Q9BWH6 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RPAP1Q9BWH6 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
RPAP1Q9BWH6 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RPAP1Q9BWH6 AL031284.1-201ENST00000419297 478 ntBASIC21.61■■□□□ 1.05
RPAP1Q9BWH6 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RPAP1Q9BWH6 AF186996.4-201ENST00000467186 377 ntBASIC21.61■■□□□ 1.05
RPAP1Q9BWH6 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RPAP1Q9BWH6 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
RPAP1Q9BWH6 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RPAP1Q9BWH6 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC21.61■■□□□ 1.05
RPAP1Q9BWH6 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC21.61■■□□□ 1.05
RPAP1Q9BWH6 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
RPAP1Q9BWH6 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC21.6■■□□□ 1.05
RPAP1Q9BWH6 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPAP1Q9BWH6 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RPAP1Q9BWH6 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC21.6■■□□□ 1.05
RPAP1Q9BWH6 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC21.6■■□□□ 1.05
RPAP1Q9BWH6 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPAP1Q9BWH6 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPAP1Q9BWH6 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RPAP1Q9BWH6 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RPAP1Q9BWH6 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
RPAP1Q9BWH6 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPAP1Q9BWH6 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPAP1Q9BWH6 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPAP1Q9BWH6 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
RPAP1Q9BWH6 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC21.6■■□□□ 1.05
RPAP1Q9BWH6 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPAP1Q9BWH6 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RPAP1Q9BWH6 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPAP1Q9BWH6 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPAP1Q9BWH6 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPAP1Q9BWH6 RBM17P3-201ENST00000417687 1192 ntBASIC21.6■■□□□ 1.05
RPAP1Q9BWH6 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RPAP1Q9BWH6 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPAP1Q9BWH6 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RPAP1Q9BWH6 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC21.6■■□□□ 1.05
RPAP1Q9BWH6 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC21.6■■□□□ 1.05
RPAP1Q9BWH6 MOK-208ENST00000519058 917 ntTSL 2 BASIC21.6■■□□□ 1.05
RPAP1Q9BWH6 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC21.6■■□□□ 1.05
RPAP1Q9BWH6 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
RPAP1Q9BWH6 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RPAP1Q9BWH6 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
RPAP1Q9BWH6 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RPAP1Q9BWH6 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
RPAP1Q9BWH6 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RPAP1Q9BWH6 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RPAP1Q9BWH6 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC21.59■■□□□ 1.05
RPAP1Q9BWH6 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RPAP1Q9BWH6 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC21.59■■□□□ 1.05
RPAP1Q9BWH6 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
RPAP1Q9BWH6 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RPAP1Q9BWH6 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RPAP1Q9BWH6 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RPAP1Q9BWH6 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RPAP1Q9BWH6 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RPAP1Q9BWH6 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RPAP1Q9BWH6 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC21.59■■□□□ 1.05
RPAP1Q9BWH6 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC21.59■■□□□ 1.05
RPAP1Q9BWH6 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RPAP1Q9BWH6 THAP5-204ENST00000438865 868 ntTSL 2 BASIC21.59■■□□□ 1.05
RPAP1Q9BWH6 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
RPAP1Q9BWH6 DUTP2-201ENST00000519164 463 ntBASIC21.59■■□□□ 1.05
RPAP1Q9BWH6 SLC25A1P1-201ENST00000528351 927 ntBASIC21.59■■□□□ 1.05
RPAP1Q9BWH6 AL355877.3-201ENST00000622820 899 ntBASIC21.59■■□□□ 1.05
RPAP1Q9BWH6 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RPAP1Q9BWH6 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RPAP1Q9BWH6 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RPAP1Q9BWH6 AC134043.2-201ENST00000624206 2238 ntBASIC21.58■■□□□ 1.05
RPAP1Q9BWH6 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC21.58■■□□□ 1.05
RPAP1Q9BWH6 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RPAP1Q9BWH6 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
RPAP1Q9BWH6 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RPAP1Q9BWH6 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RPAP1Q9BWH6 LINC00896-202ENST00000609602 2128 ntBASIC21.58■■□□□ 1.05
RPAP1Q9BWH6 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RPAP1Q9BWH6 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RPAP1Q9BWH6 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC21.58■■□□□ 1.05
RPAP1Q9BWH6 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RPAP1Q9BWH6 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RPAP1Q9BWH6 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
RPAP1Q9BWH6 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RPAP1Q9BWH6 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RPAP1Q9BWH6 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.04
RPAP1Q9BWH6 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC21.58■■□□□ 1.04
RPAP1Q9BWH6 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC21.58■■□□□ 1.04
RPAP1Q9BWH6 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC21.58■■□□□ 1.04
RPAP1Q9BWH6 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RPAP1Q9BWH6 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC21.58■■□□□ 1.04
RPAP1Q9BWH6 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC21.58■■□□□ 1.04
RPAP1Q9BWH6 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RPAP1Q9BWH6 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC21.58■■□□□ 1.04
RPAP1Q9BWH6 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21.58■■□□□ 1.04
RPAP1Q9BWH6 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RPAP1Q9BWH6 LINC00602-201ENST00000629776 2065 ntBASIC21.58■■□□□ 1.04
RPAP1Q9BWH6 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RPAP1Q9BWH6 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
RPAP1Q9BWH6 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms