Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SSBP4Q9BWG4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 TSPY26P-202ENST00000565928 3884 ntBASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 TPR-209ENST00000613151 2478 ntTSL 5 BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 FLJ38576-201ENST00000623820 2459 ntBASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 MTDHP1-201ENST00000605323 784 ntBASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SSBP4Q9BWG4 GMCL1P1-201ENST00000463439 1581 ntBASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 AC079328.2-201ENST00000561241 3354 ntBASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 KRT16P5-201ENST00000455284 522 ntBASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 UNC93B5-201ENST00000530315 699 ntBASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms