Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.94□□□□□ -0.02
CCL13Q99616 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL13Q99616 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL13Q99616 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL13Q99616 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL13Q99616 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCL13Q99616 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL13Q99616 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL13Q99616 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CCL13Q99616 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL13Q99616 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL13Q99616 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL13Q99616 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL13Q99616 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL13Q99616 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CCL13Q99616 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL13Q99616 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.94□□□□□ -0.02
CCL13Q99616 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CCL13Q99616 KRT18P55-202ENST00000578578 1546 ntBASIC14.94□□□□□ -0.02
CCL13Q99616 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CCL13Q99616 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL13Q99616 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCL13Q99616 PPIH-202ENST00000372549 327 ntTSL 3 BASIC14.94□□□□□ -0.02
CCL13Q99616 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
CCL13Q99616 AL845331.1-201ENST00000424978 1190 ntBASIC14.94□□□□□ -0.02
CCL13Q99616 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.94□□□□□ -0.02
CCL13Q99616 VENTXP7-201ENST00000475503 772 ntBASIC14.94□□□□□ -0.02
CCL13Q99616 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.94□□□□□ -0.02
CCL13Q99616 AP000867.3-201ENST00000524675 377 ntBASIC14.94□□□□□ -0.02
CCL13Q99616 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL13Q99616 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCL13Q99616 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.94□□□□□ -0.02
CCL13Q99616 MIR3180-1-201ENST00000580374 94 ntBASIC14.94□□□□□ -0.02
CCL13Q99616 MIR3180-3-201ENST00000584616 94 ntBASIC14.94□□□□□ -0.02
CCL13Q99616 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL13Q99616 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL13Q99616 KRT8P47-201ENST00000604727 1398 ntBASIC14.94□□□□□ -0.02
CCL13Q99616 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL13Q99616 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL13Q99616 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL13Q99616 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.94□□□□□ -0.02
CCL13Q99616 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL13Q99616 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCL13Q99616 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC14.94□□□□□ -0.02
CCL13Q99616 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.94□□□□□ -0.02
CCL13Q99616 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCL13Q99616 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCL13Q99616 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCL13Q99616 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCL13Q99616 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC14.94□□□□□ -0.02
CCL13Q99616 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCL13Q99616 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCL13Q99616 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCL13Q99616 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCL13Q99616 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCL13Q99616 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCL13Q99616 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
CCL13Q99616 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCL13Q99616 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CCL13Q99616 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCL13Q99616 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC14.93□□□□□ -0.02
CCL13Q99616 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCL13Q99616 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCL13Q99616 DRAXINP1-201ENST00000437611 948 ntBASIC14.93□□□□□ -0.02
CCL13Q99616 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
CCL13Q99616 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC14.93□□□□□ -0.02
CCL13Q99616 AC091607.1-201ENST00000490318 1060 ntBASIC14.93□□□□□ -0.02
CCL13Q99616 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.93□□□□□ -0.02
CCL13Q99616 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCL13Q99616 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.93□□□□□ -0.02
CCL13Q99616 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCL13Q99616 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCL13Q99616 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CCL13Q99616 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
CCL13Q99616 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC14.93□□□□□ -0.02
CCL13Q99616 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCL13Q99616 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC14.93□□□□□ -0.02
CCL13Q99616 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.93□□□□□ -0.02
CCL13Q99616 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCL13Q99616 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCL13Q99616 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCL13Q99616 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCL13Q99616 HLA-DQB1-201ENST00000374943 1656 ntBASIC14.93□□□□□ -0.02
CCL13Q99616 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCL13Q99616 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC14.93□□□□□ -0.02
CCL13Q99616 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCL13Q99616 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
CCL13Q99616 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCL13Q99616 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CCL13Q99616 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCL13Q99616 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCL13Q99616 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCL13Q99616 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCL13Q99616 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCL13Q99616 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.92□□□□□ -0.02
CCL13Q99616 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCL13Q99616 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCL13Q99616 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.92□□□□□ -0.02
CCL13Q99616 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CCL13Q99616 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms