Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.98■□□□□ 0.47
PHOX2BQ99453 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.98■□□□□ 0.47
PHOX2BQ99453 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.98■□□□□ 0.47
PHOX2BQ99453 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
PHOX2BQ99453 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PHOX2BQ99453 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.98■□□□□ 0.47
PHOX2BQ99453 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PHOX2BQ99453 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PHOX2BQ99453 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PHOX2BQ99453 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PHOX2BQ99453 AL512353.2-201ENST00000448759 1962 ntBASIC17.98■□□□□ 0.47
PHOX2BQ99453 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PHOX2BQ99453 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
PHOX2BQ99453 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PHOX2BQ99453 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PHOX2BQ99453 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.98■□□□□ 0.47
PHOX2BQ99453 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.98■□□□□ 0.47
PHOX2BQ99453 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PHOX2BQ99453 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PHOX2BQ99453 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
PHOX2BQ99453 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PHOX2BQ99453 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PHOX2BQ99453 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PHOX2BQ99453 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PHOX2BQ99453 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PHOX2BQ99453 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PHOX2BQ99453 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.97■□□□□ 0.47
PHOX2BQ99453 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PHOX2BQ99453 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PHOX2BQ99453 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PHOX2BQ99453 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PHOX2BQ99453 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PHOX2BQ99453 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PHOX2BQ99453 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PHOX2BQ99453 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PHOX2BQ99453 ELK2BP-201ENST00000415014 1224 ntBASIC17.97■□□□□ 0.47
PHOX2BQ99453 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PHOX2BQ99453 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PHOX2BQ99453 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PHOX2BQ99453 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.97■□□□□ 0.47
PHOX2BQ99453 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.97■□□□□ 0.47
PHOX2BQ99453 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
PHOX2BQ99453 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
PHOX2BQ99453 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.97■□□□□ 0.47
PHOX2BQ99453 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PHOX2BQ99453 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PHOX2BQ99453 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.97■□□□□ 0.47
PHOX2BQ99453 ZNF815P-204ENST00000434898 1737 ntBASIC17.97■□□□□ 0.47
PHOX2BQ99453 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PHOX2BQ99453 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
PHOX2BQ99453 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.97■□□□□ 0.47
PHOX2BQ99453 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PHOX2BQ99453 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
PHOX2BQ99453 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PHOX2BQ99453 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PHOX2BQ99453 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PHOX2BQ99453 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PHOX2BQ99453 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PHOX2BQ99453 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PHOX2BQ99453 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.96■□□□□ 0.47
PHOX2BQ99453 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PHOX2BQ99453 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PHOX2BQ99453 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.96■□□□□ 0.47
PHOX2BQ99453 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.96■□□□□ 0.47
PHOX2BQ99453 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PHOX2BQ99453 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PHOX2BQ99453 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
PHOX2BQ99453 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PHOX2BQ99453 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PHOX2BQ99453 TFAMP1-201ENST00000412727 736 ntBASIC17.96■□□□□ 0.47
PHOX2BQ99453 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.96■□□□□ 0.47
PHOX2BQ99453 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PHOX2BQ99453 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.96■□□□□ 0.47
PHOX2BQ99453 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.96■□□□□ 0.47
PHOX2BQ99453 FAM86GP-201ENST00000448322 971 ntBASIC17.96■□□□□ 0.47
PHOX2BQ99453 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.96■□□□□ 0.47
PHOX2BQ99453 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PHOX2BQ99453 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PHOX2BQ99453 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.96■□□□□ 0.47
PHOX2BQ99453 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.96■□□□□ 0.47
PHOX2BQ99453 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PHOX2BQ99453 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.96■□□□□ 0.47
PHOX2BQ99453 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.96■□□□□ 0.47
PHOX2BQ99453 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
PHOX2BQ99453 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PHOX2BQ99453 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
PHOX2BQ99453 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PHOX2BQ99453 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PHOX2BQ99453 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.96■□□□□ 0.47
PHOX2BQ99453 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PHOX2BQ99453 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.96■□□□□ 0.47
PHOX2BQ99453 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
PHOX2BQ99453 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.96■□□□□ 0.46
PHOX2BQ99453 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.96■□□□□ 0.46
PHOX2BQ99453 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
PHOX2BQ99453 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
PHOX2BQ99453 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.96■□□□□ 0.46
PHOX2BQ99453 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PHOX2BQ99453 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
PHOX2BQ99453 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms