Protein–RNA interactions for Protein: Q96RR1

TWNK, Twinkle protein, mitochondrial, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWNKQ96RR1 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TWNKQ96RR1 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TWNKQ96RR1 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TWNKQ96RR1 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TWNKQ96RR1 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TWNKQ96RR1 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TWNKQ96RR1 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
TWNKQ96RR1 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TWNKQ96RR1 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
TWNKQ96RR1 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TWNKQ96RR1 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TWNKQ96RR1 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TWNKQ96RR1 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TWNKQ96RR1 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
TWNKQ96RR1 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
TWNKQ96RR1 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TWNKQ96RR1 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.87■□□□□ 0.61
TWNKQ96RR1 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TWNKQ96RR1 COX5BP2-201ENST00000392354 334 ntBASIC18.87■□□□□ 0.61
TWNKQ96RR1 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TWNKQ96RR1 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
TWNKQ96RR1 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
TWNKQ96RR1 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TWNKQ96RR1 POM121L3P-201ENST00000419331 1163 ntBASIC18.87■□□□□ 0.61
TWNKQ96RR1 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.87■□□□□ 0.61
TWNKQ96RR1 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.87■□□□□ 0.61
TWNKQ96RR1 UNC93B7-201ENST00000509439 705 ntBASIC18.87■□□□□ 0.61
TWNKQ96RR1 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TWNKQ96RR1 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TWNKQ96RR1 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.87■□□□□ 0.61
TWNKQ96RR1 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TWNKQ96RR1 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.87■□□□□ 0.61
TWNKQ96RR1 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.87■□□□□ 0.61
TWNKQ96RR1 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.87■□□□□ 0.61
TWNKQ96RR1 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TWNKQ96RR1 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.87■□□□□ 0.61
TWNKQ96RR1 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TWNKQ96RR1 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TWNKQ96RR1 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TWNKQ96RR1 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TWNKQ96RR1 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TWNKQ96RR1 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TWNKQ96RR1 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TWNKQ96RR1 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.86■□□□□ 0.61
TWNKQ96RR1 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.86■□□□□ 0.61
TWNKQ96RR1 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
TWNKQ96RR1 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.86■□□□□ 0.61
TWNKQ96RR1 SIRPAP1-201ENST00000448467 1770 ntBASIC18.86■□□□□ 0.61
TWNKQ96RR1 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TWNKQ96RR1 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TWNKQ96RR1 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.86■□□□□ 0.61
TWNKQ96RR1 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TWNKQ96RR1 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TWNKQ96RR1 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.86■□□□□ 0.61
TWNKQ96RR1 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.86■□□□□ 0.61
TWNKQ96RR1 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.86■□□□□ 0.61
TWNKQ96RR1 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.86■□□□□ 0.61
TWNKQ96RR1 KRT18P31-201ENST00000506277 1292 ntBASIC18.86■□□□□ 0.61
TWNKQ96RR1 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.86■□□□□ 0.61
TWNKQ96RR1 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.86■□□□□ 0.61
TWNKQ96RR1 MIR5100-201ENST00000579544 119 ntBASIC18.86■□□□□ 0.61
TWNKQ96RR1 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TWNKQ96RR1 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
TWNKQ96RR1 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.86■□□□□ 0.61
TWNKQ96RR1 AL355312.1-201ENST00000407115 2176 ntBASIC18.86■□□□□ 0.61
TWNKQ96RR1 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TWNKQ96RR1 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
TWNKQ96RR1 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TWNKQ96RR1 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TWNKQ96RR1 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
TWNKQ96RR1 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TWNKQ96RR1 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TWNKQ96RR1 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.86■□□□□ 0.61
TWNKQ96RR1 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.86■□□□□ 0.61
TWNKQ96RR1 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TWNKQ96RR1 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TWNKQ96RR1 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
TWNKQ96RR1 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.85■□□□□ 0.61
TWNKQ96RR1 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TWNKQ96RR1 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TWNKQ96RR1 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
TWNKQ96RR1 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TWNKQ96RR1 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TWNKQ96RR1 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TWNKQ96RR1 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TWNKQ96RR1 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TWNKQ96RR1 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TWNKQ96RR1 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.85■□□□□ 0.61
TWNKQ96RR1 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.85■□□□□ 0.61
TWNKQ96RR1 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.85■□□□□ 0.61
TWNKQ96RR1 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.85■□□□□ 0.61
TWNKQ96RR1 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TWNKQ96RR1 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TWNKQ96RR1 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.85■□□□□ 0.61
TWNKQ96RR1 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TWNKQ96RR1 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.85■□□□□ 0.61
TWNKQ96RR1 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TWNKQ96RR1 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TWNKQ96RR1 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.85■□□□□ 0.61
TWNKQ96RR1 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms