Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL21A1Q96P44 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL21A1Q96P44 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.86■□□□□ 0.29
COL21A1Q96P44 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL21A1Q96P44 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COL21A1Q96P44 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL21A1Q96P44 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL21A1Q96P44 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.86■□□□□ 0.29
COL21A1Q96P44 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COL21A1Q96P44 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.86■□□□□ 0.29
COL21A1Q96P44 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COL21A1Q96P44 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL21A1Q96P44 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.86■□□□□ 0.29
COL21A1Q96P44 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.86■□□□□ 0.29
COL21A1Q96P44 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.86■□□□□ 0.29
COL21A1Q96P44 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL21A1Q96P44 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.86■□□□□ 0.29
COL21A1Q96P44 AC010331.1-201ENST00000611423 582 ntBASIC16.86■□□□□ 0.29
COL21A1Q96P44 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.86■□□□□ 0.29
COL21A1Q96P44 PCDHA12-202ENST00000613593 2588 ntBASIC16.86■□□□□ 0.29
COL21A1Q96P44 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL21A1Q96P44 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COL21A1Q96P44 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL21A1Q96P44 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL21A1Q96P44 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
COL21A1Q96P44 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL21A1Q96P44 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL21A1Q96P44 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.86■□□□□ 0.29
COL21A1Q96P44 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL21A1Q96P44 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL21A1Q96P44 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL21A1Q96P44 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
COL21A1Q96P44 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL21A1Q96P44 AL645608.8-201ENST00000606034 2086 ntBASIC16.85■□□□□ 0.29
COL21A1Q96P44 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL21A1Q96P44 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL21A1Q96P44 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL21A1Q96P44 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL21A1Q96P44 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL21A1Q96P44 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
COL21A1Q96P44 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL21A1Q96P44 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL21A1Q96P44 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
COL21A1Q96P44 HBZP1-201ENST00000354915 429 ntBASIC16.85■□□□□ 0.29
COL21A1Q96P44 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.85■□□□□ 0.29
COL21A1Q96P44 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL21A1Q96P44 HLA-F-220ENST00000434407 884 ntBASIC16.85■□□□□ 0.29
COL21A1Q96P44 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.85■□□□□ 0.29
COL21A1Q96P44 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.85■□□□□ 0.29
COL21A1Q96P44 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
COL21A1Q96P44 HYMAI.1-201ENST00000620949 238 ntBASIC16.85■□□□□ 0.29
COL21A1Q96P44 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.85■□□□□ 0.29
COL21A1Q96P44 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
COL21A1Q96P44 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL21A1Q96P44 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL21A1Q96P44 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL21A1Q96P44 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL21A1Q96P44 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL21A1Q96P44 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
COL21A1Q96P44 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
COL21A1Q96P44 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
COL21A1Q96P44 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.85■□□□□ 0.29
COL21A1Q96P44 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
COL21A1Q96P44 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL21A1Q96P44 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL21A1Q96P44 KRT18P55-202ENST00000578578 1546 ntBASIC16.85■□□□□ 0.29
COL21A1Q96P44 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL21A1Q96P44 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL21A1Q96P44 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL21A1Q96P44 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.85■□□□□ 0.29
COL21A1Q96P44 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL21A1Q96P44 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL21A1Q96P44 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL21A1Q96P44 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL21A1Q96P44 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.84■□□□□ 0.29
COL21A1Q96P44 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.84■□□□□ 0.29
COL21A1Q96P44 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.84■□□□□ 0.29
COL21A1Q96P44 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL21A1Q96P44 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL21A1Q96P44 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.84■□□□□ 0.29
COL21A1Q96P44 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
COL21A1Q96P44 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL21A1Q96P44 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL21A1Q96P44 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL21A1Q96P44 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.84■□□□□ 0.29
COL21A1Q96P44 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.84■□□□□ 0.29
COL21A1Q96P44 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.84■□□□□ 0.29
COL21A1Q96P44 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
COL21A1Q96P44 AC008687.5-201ENST00000593746 558 ntBASIC16.84■□□□□ 0.29
COL21A1Q96P44 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
COL21A1Q96P44 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.84■□□□□ 0.29
COL21A1Q96P44 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.84■□□□□ 0.29
COL21A1Q96P44 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL21A1Q96P44 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.84■□□□□ 0.29
COL21A1Q96P44 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL21A1Q96P44 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL21A1Q96P44 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.84■□□□□ 0.29
COL21A1Q96P44 AC006116.8-202ENST00000587620 1550 ntBASIC16.84■□□□□ 0.29
COL21A1Q96P44 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL21A1Q96P44 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms