Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
NECTIN4Q96NY8 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NECTIN4Q96NY8 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.37■□□□□ 0.53
NECTIN4Q96NY8 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NECTIN4Q96NY8 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NECTIN4Q96NY8 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NECTIN4Q96NY8 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
NECTIN4Q96NY8 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NECTIN4Q96NY8 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NECTIN4Q96NY8 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
NECTIN4Q96NY8 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
NECTIN4Q96NY8 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
NECTIN4Q96NY8 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NECTIN4Q96NY8 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NECTIN4Q96NY8 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NECTIN4Q96NY8 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NECTIN4Q96NY8 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NECTIN4Q96NY8 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
NECTIN4Q96NY8 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NECTIN4Q96NY8 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NECTIN4Q96NY8 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
NECTIN4Q96NY8 AL035633.1-201ENST00000406139 838 ntBASIC18.36■□□□□ 0.53
NECTIN4Q96NY8 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.36■□□□□ 0.53
NECTIN4Q96NY8 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.36■□□□□ 0.53
NECTIN4Q96NY8 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NECTIN4Q96NY8 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.36■□□□□ 0.53
NECTIN4Q96NY8 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NECTIN4Q96NY8 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NECTIN4Q96NY8 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.36■□□□□ 0.53
NECTIN4Q96NY8 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
NECTIN4Q96NY8 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.36■□□□□ 0.53
NECTIN4Q96NY8 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.36■□□□□ 0.53
NECTIN4Q96NY8 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.36■□□□□ 0.53
NECTIN4Q96NY8 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.36■□□□□ 0.53
NECTIN4Q96NY8 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.36■□□□□ 0.53
NECTIN4Q96NY8 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.36■□□□□ 0.53
NECTIN4Q96NY8 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.36■□□□□ 0.53
NECTIN4Q96NY8 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
NECTIN4Q96NY8 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NECTIN4Q96NY8 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NECTIN4Q96NY8 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NECTIN4Q96NY8 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.36■□□□□ 0.53
NECTIN4Q96NY8 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.36■□□□□ 0.53
NECTIN4Q96NY8 AC004877.2-201ENST00000623941 599 ntBASIC18.36■□□□□ 0.53
NECTIN4Q96NY8 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
NECTIN4Q96NY8 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NECTIN4Q96NY8 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
NECTIN4Q96NY8 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.35■□□□□ 0.53
NECTIN4Q96NY8 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
NECTIN4Q96NY8 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NECTIN4Q96NY8 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NECTIN4Q96NY8 IGLL3P-201ENST00000412472 434 ntBASIC18.35■□□□□ 0.53
NECTIN4Q96NY8 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.35■□□□□ 0.53
NECTIN4Q96NY8 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.35■□□□□ 0.53
NECTIN4Q96NY8 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.35■□□□□ 0.53
NECTIN4Q96NY8 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.35■□□□□ 0.53
NECTIN4Q96NY8 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.35■□□□□ 0.53
NECTIN4Q96NY8 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.35■□□□□ 0.53
NECTIN4Q96NY8 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.35■□□□□ 0.53
NECTIN4Q96NY8 GGTLC5P-201ENST00000617623 998 ntBASIC18.35■□□□□ 0.53
NECTIN4Q96NY8 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.35■□□□□ 0.53
NECTIN4Q96NY8 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NECTIN4Q96NY8 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.35■□□□□ 0.53
NECTIN4Q96NY8 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NECTIN4Q96NY8 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NECTIN4Q96NY8 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NECTIN4Q96NY8 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NECTIN4Q96NY8 AC132938.5-201ENST00000624980 1813 ntBASIC18.35■□□□□ 0.53
NECTIN4Q96NY8 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NECTIN4Q96NY8 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.34■□□□□ 0.53
NECTIN4Q96NY8 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
NECTIN4Q96NY8 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.34■□□□□ 0.53
NECTIN4Q96NY8 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
NECTIN4Q96NY8 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.34■□□□□ 0.53
NECTIN4Q96NY8 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.34■□□□□ 0.53
NECTIN4Q96NY8 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NECTIN4Q96NY8 BCAR1-209ENST00000546196 1340 ntBASIC18.34■□□□□ 0.53
NECTIN4Q96NY8 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NECTIN4Q96NY8 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
NECTIN4Q96NY8 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.34■□□□□ 0.53
NECTIN4Q96NY8 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.34■□□□□ 0.53
NECTIN4Q96NY8 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NECTIN4Q96NY8 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
NECTIN4Q96NY8 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
NECTIN4Q96NY8 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
NECTIN4Q96NY8 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.34■□□□□ 0.53
NECTIN4Q96NY8 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.34■□□□□ 0.53
NECTIN4Q96NY8 KRT19P2-202ENST00000557173 1012 ntBASIC18.34■□□□□ 0.53
NECTIN4Q96NY8 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.34■□□□□ 0.53
NECTIN4Q96NY8 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
NECTIN4Q96NY8 AC093028.1-201ENST00000622998 982 ntBASIC18.34■□□□□ 0.53
NECTIN4Q96NY8 AC010507.1-201ENST00000633895 436 ntBASIC18.34■□□□□ 0.53
NECTIN4Q96NY8 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NECTIN4Q96NY8 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.34■□□□□ 0.53
NECTIN4Q96NY8 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NECTIN4Q96NY8 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NECTIN4Q96NY8 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.34■□□□□ 0.53
NECTIN4Q96NY8 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
NECTIN4Q96NY8 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NECTIN4Q96NY8 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms