Protein–RNA interactions for Protein: Q96LM1

LINC00615, Putative uncharacterized protein encoded by LINC00615, humanhuman

Predicted RBP Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00615Q96LM1 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC00615Q96LM1 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC00615Q96LM1 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.32■□□□□ 0.36
LINC00615Q96LM1 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.32■□□□□ 0.36
LINC00615Q96LM1 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LINC00615Q96LM1 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC00615Q96LM1 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.32■□□□□ 0.36
LINC00615Q96LM1 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC00615Q96LM1 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.32■□□□□ 0.36
LINC00615Q96LM1 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LINC00615Q96LM1 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC00615Q96LM1 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC00615Q96LM1 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.32■□□□□ 0.36
LINC00615Q96LM1 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LINC00615Q96LM1 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.32■□□□□ 0.36
LINC00615Q96LM1 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.32■□□□□ 0.36
LINC00615Q96LM1 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.32■□□□□ 0.36
LINC00615Q96LM1 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.32■□□□□ 0.36
LINC00615Q96LM1 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC00615Q96LM1 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.32■□□□□ 0.36
LINC00615Q96LM1 AC106795.1-205ENST00000512851 1056 ntBASIC17.32■□□□□ 0.36
LINC00615Q96LM1 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.32■□□□□ 0.36
LINC00615Q96LM1 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LINC00615Q96LM1 REXO1L6P-202ENST00000619970 1078 ntBASIC17.32■□□□□ 0.36
LINC00615Q96LM1 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.32■□□□□ 0.36
LINC00615Q96LM1 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC00615Q96LM1 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.32■□□□□ 0.36
LINC00615Q96LM1 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.32■□□□□ 0.36
LINC00615Q96LM1 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC00615Q96LM1 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
LINC00615Q96LM1 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
LINC00615Q96LM1 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
LINC00615Q96LM1 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00615Q96LM1 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00615Q96LM1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00615Q96LM1 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00615Q96LM1 LINC00304-203ENST00000565008 1864 ntBASIC17.31■□□□□ 0.36
LINC00615Q96LM1 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00615Q96LM1 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00615Q96LM1 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00615Q96LM1 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00615Q96LM1 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LINC00615Q96LM1 AC007613.1-201ENST00000572811 2597 ntBASIC17.31■□□□□ 0.36
LINC00615Q96LM1 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.31■□□□□ 0.36
LINC00615Q96LM1 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00615Q96LM1 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00615Q96LM1 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00615Q96LM1 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.31■□□□□ 0.36
LINC00615Q96LM1 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00615Q96LM1 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00615Q96LM1 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00615Q96LM1 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00615Q96LM1 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LINC00615Q96LM1 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00615Q96LM1 PMPCAP1-201ENST00000508114 1576 ntBASIC17.31■□□□□ 0.36
LINC00615Q96LM1 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.31■□□□□ 0.36
LINC00615Q96LM1 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00615Q96LM1 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LINC00615Q96LM1 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00615Q96LM1 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00615Q96LM1 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LINC00615Q96LM1 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC00615Q96LM1 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.3■□□□□ 0.36
LINC00615Q96LM1 SIRPAP1-201ENST00000448467 1770 ntBASIC17.3■□□□□ 0.36
LINC00615Q96LM1 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC00615Q96LM1 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.3■□□□□ 0.36
LINC00615Q96LM1 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC00615Q96LM1 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
LINC00615Q96LM1 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.3■□□□□ 0.36
LINC00615Q96LM1 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
LINC00615Q96LM1 RBM17P3-201ENST00000417687 1192 ntBASIC17.3■□□□□ 0.36
LINC00615Q96LM1 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.3■□□□□ 0.36
LINC00615Q96LM1 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
LINC00615Q96LM1 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.3■□□□□ 0.36
LINC00615Q96LM1 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LINC00615Q96LM1 GNAS-203ENST00000306120 1878 ntBASIC17.3■□□□□ 0.36
LINC00615Q96LM1 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC00615Q96LM1 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.3■□□□□ 0.36
LINC00615Q96LM1 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC00615Q96LM1 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
LINC00615Q96LM1 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC00615Q96LM1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC00615Q96LM1 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC00615Q96LM1 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LINC00615Q96LM1 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC00615Q96LM1 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC00615Q96LM1 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC00615Q96LM1 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.3■□□□□ 0.36
LINC00615Q96LM1 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
LINC00615Q96LM1 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC00615Q96LM1 AP005117.1-201ENST00000584346 1413 ntBASIC17.3■□□□□ 0.36
LINC00615Q96LM1 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC00615Q96LM1 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC00615Q96LM1 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LINC00615Q96LM1 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC00615Q96LM1 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.29■□□□□ 0.36
LINC00615Q96LM1 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LINC00615Q96LM1 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LINC00615Q96LM1 AKR1C7P-201ENST00000305623 895 ntBASIC17.29■□□□□ 0.36
LINC00615Q96LM1 MYCLP1-201ENST00000372451 1075 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms