Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
IFT43Q96FT9 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
IFT43Q96FT9 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.38■□□□□ 0.53
IFT43Q96FT9 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
IFT43Q96FT9 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
IFT43Q96FT9 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
IFT43Q96FT9 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
IFT43Q96FT9 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
IFT43Q96FT9 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
IFT43Q96FT9 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
IFT43Q96FT9 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
IFT43Q96FT9 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.38■□□□□ 0.53
IFT43Q96FT9 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
IFT43Q96FT9 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
IFT43Q96FT9 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.38■□□□□ 0.53
IFT43Q96FT9 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
IFT43Q96FT9 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.37■□□□□ 0.53
IFT43Q96FT9 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IFT43Q96FT9 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IFT43Q96FT9 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
IFT43Q96FT9 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
IFT43Q96FT9 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
IFT43Q96FT9 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.37■□□□□ 0.53
IFT43Q96FT9 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
IFT43Q96FT9 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.37■□□□□ 0.53
IFT43Q96FT9 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.37■□□□□ 0.53
IFT43Q96FT9 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
IFT43Q96FT9 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
IFT43Q96FT9 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IFT43Q96FT9 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
IFT43Q96FT9 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IFT43Q96FT9 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
IFT43Q96FT9 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.37■□□□□ 0.53
IFT43Q96FT9 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.37■□□□□ 0.53
IFT43Q96FT9 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
IFT43Q96FT9 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IFT43Q96FT9 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IFT43Q96FT9 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
IFT43Q96FT9 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
IFT43Q96FT9 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
IFT43Q96FT9 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
IFT43Q96FT9 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
IFT43Q96FT9 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
IFT43Q96FT9 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.36■□□□□ 0.53
IFT43Q96FT9 MIR662-201ENST00000384847 95 ntBASIC18.36■□□□□ 0.53
IFT43Q96FT9 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
IFT43Q96FT9 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
IFT43Q96FT9 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
IFT43Q96FT9 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.36■□□□□ 0.53
IFT43Q96FT9 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.36■□□□□ 0.53
IFT43Q96FT9 TSSC2-201ENST00000450217 709 ntBASIC18.36■□□□□ 0.53
IFT43Q96FT9 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.36■□□□□ 0.53
IFT43Q96FT9 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
IFT43Q96FT9 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.36■□□□□ 0.53
IFT43Q96FT9 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.36■□□□□ 0.53
IFT43Q96FT9 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
IFT43Q96FT9 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
IFT43Q96FT9 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
IFT43Q96FT9 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.36■□□□□ 0.53
IFT43Q96FT9 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.35■□□□□ 0.53
IFT43Q96FT9 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.35■□□□□ 0.53
IFT43Q96FT9 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.35■□□□□ 0.53
IFT43Q96FT9 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
IFT43Q96FT9 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IFT43Q96FT9 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
IFT43Q96FT9 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.35■□□□□ 0.53
IFT43Q96FT9 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IFT43Q96FT9 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IFT43Q96FT9 AC093010.1-201ENST00000473625 1624 ntBASIC18.35■□□□□ 0.53
IFT43Q96FT9 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
IFT43Q96FT9 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.35■□□□□ 0.53
IFT43Q96FT9 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
IFT43Q96FT9 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
IFT43Q96FT9 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
IFT43Q96FT9 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
IFT43Q96FT9 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IFT43Q96FT9 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IFT43Q96FT9 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IFT43Q96FT9 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
IFT43Q96FT9 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
IFT43Q96FT9 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.35■□□□□ 0.53
IFT43Q96FT9 KRT8P26-201ENST00000534154 1276 ntBASIC18.35■□□□□ 0.53
IFT43Q96FT9 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.35■□□□□ 0.53
IFT43Q96FT9 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.35■□□□□ 0.53
IFT43Q96FT9 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.35■□□□□ 0.53
IFT43Q96FT9 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.35■□□□□ 0.53
IFT43Q96FT9 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.35■□□□□ 0.53
IFT43Q96FT9 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IFT43Q96FT9 AL691432.3-201ENST00000621860 400 ntBASIC18.35■□□□□ 0.53
IFT43Q96FT9 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.35■□□□□ 0.53
IFT43Q96FT9 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.35■□□□□ 0.53
IFT43Q96FT9 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
IFT43Q96FT9 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.35■□□□□ 0.53
IFT43Q96FT9 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
IFT43Q96FT9 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.35■□□□□ 0.53
IFT43Q96FT9 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IFT43Q96FT9 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
IFT43Q96FT9 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IFT43Q96FT9 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
IFT43Q96FT9 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms