Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 BX276092.7-203ENST00000637198 1536 ntBASIC18■□□□□ 0.47
LRRC39Q96DD0 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18■□□□□ 0.47
LRRC39Q96DD0 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18■□□□□ 0.47
LRRC39Q96DD0 RASA4DP-201ENST00000460726 1199 ntBASIC18■□□□□ 0.47
LRRC39Q96DD0 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18■□□□□ 0.47
LRRC39Q96DD0 AL031432.5-201ENST00000641059 760 ntBASIC18■□□□□ 0.47
LRRC39Q96DD0 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18■□□□□ 0.47
LRRC39Q96DD0 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
LRRC39Q96DD0 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18■□□□□ 0.47
LRRC39Q96DD0 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
LRRC39Q96DD0 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18■□□□□ 0.47
LRRC39Q96DD0 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18■□□□□ 0.47
LRRC39Q96DD0 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18■□□□□ 0.47
LRRC39Q96DD0 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LRRC39Q96DD0 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
LRRC39Q96DD0 AL391807.1-203ENST00000604392 2365 ntBASIC17.99■□□□□ 0.47
LRRC39Q96DD0 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
LRRC39Q96DD0 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC39Q96DD0 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC39Q96DD0 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.99■□□□□ 0.47
LRRC39Q96DD0 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC39Q96DD0 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC39Q96DD0 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC39Q96DD0 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC39Q96DD0 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC39Q96DD0 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
LRRC39Q96DD0 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.99■□□□□ 0.47
LRRC39Q96DD0 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC39Q96DD0 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC39Q96DD0 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC39Q96DD0 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC39Q96DD0 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.99■□□□□ 0.47
LRRC39Q96DD0 AC005104.2-201ENST00000427818 678 ntBASIC17.99■□□□□ 0.47
LRRC39Q96DD0 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.99■□□□□ 0.47
LRRC39Q96DD0 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
LRRC39Q96DD0 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC39Q96DD0 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC39Q96DD0 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
LRRC39Q96DD0 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.99■□□□□ 0.47
LRRC39Q96DD0 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
LRRC39Q96DD0 AL136038.4-201ENST00000603606 1261 ntBASIC17.99■□□□□ 0.47
LRRC39Q96DD0 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC39Q96DD0 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC39Q96DD0 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
LRRC39Q96DD0 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC39Q96DD0 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC39Q96DD0 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC39Q96DD0 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC39Q96DD0 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRRC39Q96DD0 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
LRRC39Q96DD0 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.99■□□□□ 0.47
LRRC39Q96DD0 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.98■□□□□ 0.47
LRRC39Q96DD0 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC39Q96DD0 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC39Q96DD0 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.98■□□□□ 0.47
LRRC39Q96DD0 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
LRRC39Q96DD0 AC016396.2-201ENST00000562575 1417 ntBASIC17.98■□□□□ 0.47
LRRC39Q96DD0 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
LRRC39Q96DD0 PCDHA12-202ENST00000613593 2588 ntBASIC17.98■□□□□ 0.47
LRRC39Q96DD0 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC39Q96DD0 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC39Q96DD0 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC39Q96DD0 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
LRRC39Q96DD0 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
LRRC39Q96DD0 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC39Q96DD0 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC39Q96DD0 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
LRRC39Q96DD0 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.98■□□□□ 0.47
LRRC39Q96DD0 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC39Q96DD0 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
LRRC39Q96DD0 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
LRRC39Q96DD0 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC39Q96DD0 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC39Q96DD0 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.98■□□□□ 0.47
LRRC39Q96DD0 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.98■□□□□ 0.47
LRRC39Q96DD0 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC39Q96DD0 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
LRRC39Q96DD0 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.98■□□□□ 0.47
LRRC39Q96DD0 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.98■□□□□ 0.47
LRRC39Q96DD0 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.98■□□□□ 0.47
LRRC39Q96DD0 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.98■□□□□ 0.47
LRRC39Q96DD0 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
LRRC39Q96DD0 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC39Q96DD0 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC39Q96DD0 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC39Q96DD0 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
LRRC39Q96DD0 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
LRRC39Q96DD0 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.98■□□□□ 0.47
LRRC39Q96DD0 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.98■□□□□ 0.47
LRRC39Q96DD0 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRC39Q96DD0 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.98■□□□□ 0.47
LRRC39Q96DD0 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.97■□□□□ 0.47
LRRC39Q96DD0 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC39Q96DD0 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.97■□□□□ 0.47
LRRC39Q96DD0 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.97■□□□□ 0.47
LRRC39Q96DD0 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
LRRC39Q96DD0 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC39Q96DD0 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC39Q96DD0 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRC39Q96DD0 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms