Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SEMA4DQ92854 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.15■□□□□ 0.66
SEMA4DQ92854 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.14■□□□□ 0.66
SEMA4DQ92854 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SEMA4DQ92854 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.14■□□□□ 0.66
SEMA4DQ92854 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.14■□□□□ 0.66
SEMA4DQ92854 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.14■□□□□ 0.66
SEMA4DQ92854 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
SEMA4DQ92854 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
SEMA4DQ92854 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.14■□□□□ 0.66
SEMA4DQ92854 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
SEMA4DQ92854 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.14■□□□□ 0.65
SEMA4DQ92854 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SEMA4DQ92854 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SEMA4DQ92854 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
SEMA4DQ92854 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SEMA4DQ92854 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SEMA4DQ92854 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.14■□□□□ 0.65
SEMA4DQ92854 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.14■□□□□ 0.65
SEMA4DQ92854 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.14■□□□□ 0.65
SEMA4DQ92854 AC069148.1-201ENST00000608741 768 ntBASIC19.14■□□□□ 0.65
SEMA4DQ92854 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SEMA4DQ92854 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.14■□□□□ 0.65
SEMA4DQ92854 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SEMA4DQ92854 AC097374.2-201ENST00000618617 1306 ntBASIC19.14■□□□□ 0.65
SEMA4DQ92854 AC233702.3-201ENST00000578656 1387 ntBASIC19.14■□□□□ 0.65
SEMA4DQ92854 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SEMA4DQ92854 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SEMA4DQ92854 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.14■□□□□ 0.65
SEMA4DQ92854 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SEMA4DQ92854 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SEMA4DQ92854 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SEMA4DQ92854 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SEMA4DQ92854 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SEMA4DQ92854 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.13■□□□□ 0.65
SEMA4DQ92854 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SEMA4DQ92854 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SEMA4DQ92854 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SEMA4DQ92854 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SEMA4DQ92854 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SEMA4DQ92854 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SEMA4DQ92854 AC007967.3-201ENST00000434308 558 ntBASIC19.13■□□□□ 0.65
SEMA4DQ92854 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.13■□□□□ 0.65
SEMA4DQ92854 TOB2P1-201ENST00000469761 992 ntBASIC19.13■□□□□ 0.65
SEMA4DQ92854 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SEMA4DQ92854 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.13■□□□□ 0.65
SEMA4DQ92854 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.13■□□□□ 0.65
SEMA4DQ92854 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.13■□□□□ 0.65
SEMA4DQ92854 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SEMA4DQ92854 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.13■□□□□ 0.65
SEMA4DQ92854 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.13■□□□□ 0.65
SEMA4DQ92854 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SEMA4DQ92854 AC092119.3-201ENST00000612618 583 ntBASIC19.13■□□□□ 0.65
SEMA4DQ92854 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
SEMA4DQ92854 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.13■□□□□ 0.65
SEMA4DQ92854 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SEMA4DQ92854 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SEMA4DQ92854 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SEMA4DQ92854 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SEMA4DQ92854 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SEMA4DQ92854 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SEMA4DQ92854 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.12■□□□□ 0.65
SEMA4DQ92854 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SEMA4DQ92854 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.12■□□□□ 0.65
SEMA4DQ92854 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SEMA4DQ92854 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.12■□□□□ 0.65
SEMA4DQ92854 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.12■□□□□ 0.65
SEMA4DQ92854 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.12■□□□□ 0.65
SEMA4DQ92854 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SEMA4DQ92854 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SEMA4DQ92854 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SEMA4DQ92854 AC246785.2-201ENST00000432512 513 ntBASIC19.12■□□□□ 0.65
SEMA4DQ92854 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.12■□□□□ 0.65
SEMA4DQ92854 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SEMA4DQ92854 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.12■□□□□ 0.65
SEMA4DQ92854 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.12■□□□□ 0.65
SEMA4DQ92854 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.12■□□□□ 0.65
SEMA4DQ92854 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SEMA4DQ92854 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SEMA4DQ92854 FZD10-202ENST00000539839 3282 ntBASIC19.12■□□□□ 0.65
SEMA4DQ92854 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.12■□□□□ 0.65
SEMA4DQ92854 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SEMA4DQ92854 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SEMA4DQ92854 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SEMA4DQ92854 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
SEMA4DQ92854 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SEMA4DQ92854 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SEMA4DQ92854 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SEMA4DQ92854 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.12■□□□□ 0.65
SEMA4DQ92854 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
SEMA4DQ92854 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SEMA4DQ92854 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SEMA4DQ92854 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SEMA4DQ92854 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SEMA4DQ92854 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
SEMA4DQ92854 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.12■□□□□ 0.65
SEMA4DQ92854 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.12■□□□□ 0.65
SEMA4DQ92854 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SEMA4DQ92854 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.11■□□□□ 0.65
SEMA4DQ92854 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms