Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX1Q92499 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX1Q92499 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
DDX1Q92499 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
DDX1Q92499 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
DDX1Q92499 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.95■□□□□ 0.62
DDX1Q92499 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
DDX1Q92499 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
DDX1Q92499 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
DDX1Q92499 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
DDX1Q92499 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
DDX1Q92499 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.95■□□□□ 0.62
DDX1Q92499 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.95■□□□□ 0.62
DDX1Q92499 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
DDX1Q92499 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.95■□□□□ 0.62
DDX1Q92499 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
DDX1Q92499 AC117500.6-201ENST00000624871 588 ntBASIC18.95■□□□□ 0.62
DDX1Q92499 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
DDX1Q92499 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
DDX1Q92499 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
DDX1Q92499 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
DDX1Q92499 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
DDX1Q92499 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
DDX1Q92499 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
DDX1Q92499 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
DDX1Q92499 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
DDX1Q92499 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
DDX1Q92499 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
DDX1Q92499 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
DDX1Q92499 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
DDX1Q92499 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.94■□□□□ 0.62
DDX1Q92499 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
DDX1Q92499 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
DDX1Q92499 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
DDX1Q92499 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
DDX1Q92499 HLA-J-201ENST00000462773 1622 ntBASIC18.94■□□□□ 0.62
DDX1Q92499 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
DDX1Q92499 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
DDX1Q92499 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.94■□□□□ 0.62
DDX1Q92499 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.94■□□□□ 0.62
DDX1Q92499 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
DDX1Q92499 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.94■□□□□ 0.62
DDX1Q92499 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.94■□□□□ 0.62
DDX1Q92499 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.94■□□□□ 0.62
DDX1Q92499 AC011498.5-201ENST00000592027 486 ntBASIC18.94■□□□□ 0.62
DDX1Q92499 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.94■□□□□ 0.62
DDX1Q92499 AL353801.3-201ENST00000609898 542 ntBASIC18.94■□□□□ 0.62
DDX1Q92499 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.94■□□□□ 0.62
DDX1Q92499 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.94■□□□□ 0.62
DDX1Q92499 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
DDX1Q92499 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
DDX1Q92499 AC141586.5-201ENST00000624546 2050 ntBASIC18.94■□□□□ 0.62
DDX1Q92499 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.94■□□□□ 0.62
DDX1Q92499 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
DDX1Q92499 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.94■□□□□ 0.62
DDX1Q92499 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
DDX1Q92499 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
DDX1Q92499 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
DDX1Q92499 SIRPAP1-201ENST00000448467 1770 ntBASIC18.93■□□□□ 0.62
DDX1Q92499 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
DDX1Q92499 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
DDX1Q92499 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
DDX1Q92499 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.93■□□□□ 0.62
DDX1Q92499 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
DDX1Q92499 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
DDX1Q92499 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
DDX1Q92499 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
DDX1Q92499 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
DDX1Q92499 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
DDX1Q92499 AC096633.1-201ENST00000422446 749 ntBASIC18.93■□□□□ 0.62
DDX1Q92499 TSPY22P-201ENST00000427496 604 ntBASIC18.93■□□□□ 0.62
DDX1Q92499 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
DDX1Q92499 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
DDX1Q92499 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.93■□□□□ 0.62
DDX1Q92499 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
DDX1Q92499 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.93■□□□□ 0.62
DDX1Q92499 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
DDX1Q92499 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
DDX1Q92499 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
DDX1Q92499 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
DDX1Q92499 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
DDX1Q92499 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
DDX1Q92499 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.93■□□□□ 0.62
DDX1Q92499 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
DDX1Q92499 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
DDX1Q92499 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
DDX1Q92499 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
DDX1Q92499 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
DDX1Q92499 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
DDX1Q92499 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
DDX1Q92499 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
DDX1Q92499 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
DDX1Q92499 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.92■□□□□ 0.62
DDX1Q92499 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.92■□□□□ 0.62
DDX1Q92499 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDX1Q92499 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
DDX1Q92499 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDX1Q92499 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
DDX1Q92499 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.92■□□□□ 0.62
DDX1Q92499 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms