Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SH3TC1Q8TE82 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
SH3TC1Q8TE82 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SH3TC1Q8TE82 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC22.11■■□□□ 1.13
SH3TC1Q8TE82 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SH3TC1Q8TE82 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC22.11■■□□□ 1.13
SH3TC1Q8TE82 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
SH3TC1Q8TE82 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC22.11■■□□□ 1.13
SH3TC1Q8TE82 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC22.11■■□□□ 1.13
SH3TC1Q8TE82 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC22.11■■□□□ 1.13
SH3TC1Q8TE82 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC22.11■■□□□ 1.13
SH3TC1Q8TE82 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
SH3TC1Q8TE82 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC22.11■■□□□ 1.13
SH3TC1Q8TE82 AL589182.2-201ENST00000619332 1049 ntBASIC22.11■■□□□ 1.13
SH3TC1Q8TE82 PGM5P2-202ENST00000637225 1043 ntBASIC22.11■■□□□ 1.13
SH3TC1Q8TE82 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SH3TC1Q8TE82 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SH3TC1Q8TE82 EFTUD1P1-204ENST00000560401 1798 ntBASIC22.11■■□□□ 1.13
SH3TC1Q8TE82 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SH3TC1Q8TE82 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC22.11■■□□□ 1.13
SH3TC1Q8TE82 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC22.11■■□□□ 1.13
SH3TC1Q8TE82 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SH3TC1Q8TE82 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SH3TC1Q8TE82 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SH3TC1Q8TE82 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SH3TC1Q8TE82 MADD-208ENST00000405573 1823 ntTSL 5 BASIC22.1■■□□□ 1.13
SH3TC1Q8TE82 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
SH3TC1Q8TE82 AC007967.2-201ENST00000432613 625 ntBASIC22.1■■□□□ 1.13
SH3TC1Q8TE82 AC136632.2-201ENST00000512891 861 ntBASIC22.1■■□□□ 1.13
SH3TC1Q8TE82 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC22.1■■□□□ 1.13
SH3TC1Q8TE82 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC22.1■■□□□ 1.13
SH3TC1Q8TE82 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC22.1■■□□□ 1.13
SH3TC1Q8TE82 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC22.1■■□□□ 1.13
SH3TC1Q8TE82 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC22.1■■□□□ 1.13
SH3TC1Q8TE82 AC005593.1-201ENST00000624894 515 ntBASIC22.1■■□□□ 1.13
SH3TC1Q8TE82 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC22.1■■□□□ 1.13
SH3TC1Q8TE82 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
SH3TC1Q8TE82 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC22.1■■□□□ 1.13
SH3TC1Q8TE82 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
SH3TC1Q8TE82 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
SH3TC1Q8TE82 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SH3TC1Q8TE82 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SH3TC1Q8TE82 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SH3TC1Q8TE82 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
SH3TC1Q8TE82 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC22.1■■□□□ 1.13
SH3TC1Q8TE82 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SH3TC1Q8TE82 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC22.09■■□□□ 1.13
SH3TC1Q8TE82 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
SH3TC1Q8TE82 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SH3TC1Q8TE82 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC22.09■■□□□ 1.13
SH3TC1Q8TE82 AC005104.2-201ENST00000427818 678 ntBASIC22.09■■□□□ 1.13
SH3TC1Q8TE82 CRCP-205ENST00000431089 942 ntTSL 2 BASIC22.09■■□□□ 1.13
SH3TC1Q8TE82 RNA5SP416-201ENST00000516838 111 ntBASIC22.09■■□□□ 1.13
SH3TC1Q8TE82 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
SH3TC1Q8TE82 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC22.09■■□□□ 1.13
SH3TC1Q8TE82 AC040169.1-201ENST00000565382 521 ntBASIC22.09■■□□□ 1.13
SH3TC1Q8TE82 AL139424.1-201ENST00000607572 797 ntBASIC22.09■■□□□ 1.13
SH3TC1Q8TE82 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC22.09■■□□□ 1.13
SH3TC1Q8TE82 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
SH3TC1Q8TE82 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SH3TC1Q8TE82 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SH3TC1Q8TE82 POR-209ENST00000439269 1858 ntTSL 2 BASIC22.09■■□□□ 1.13
SH3TC1Q8TE82 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
SH3TC1Q8TE82 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SH3TC1Q8TE82 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SH3TC1Q8TE82 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SH3TC1Q8TE82 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC22.09■■□□□ 1.13
SH3TC1Q8TE82 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SH3TC1Q8TE82 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SH3TC1Q8TE82 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SH3TC1Q8TE82 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SH3TC1Q8TE82 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SH3TC1Q8TE82 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
SH3TC1Q8TE82 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SH3TC1Q8TE82 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC22.08■■□□□ 1.13
SH3TC1Q8TE82 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC22.08■■□□□ 1.13
SH3TC1Q8TE82 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC22.08■■□□□ 1.13
SH3TC1Q8TE82 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC22.08■■□□□ 1.13
SH3TC1Q8TE82 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SH3TC1Q8TE82 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC22.08■■□□□ 1.13
SH3TC1Q8TE82 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC22.08■■□□□ 1.13
SH3TC1Q8TE82 CYB561-217ENST00000582997 877 ntTSL 5 BASIC22.08■■□□□ 1.13
SH3TC1Q8TE82 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SH3TC1Q8TE82 COPE-211ENST00000600932 1144 ntTSL 5 BASIC22.08■■□□□ 1.13
SH3TC1Q8TE82 AC019129.2-201ENST00000609837 1235 ntBASIC22.08■■□□□ 1.13
SH3TC1Q8TE82 AC148477.5-201ENST00000625164 1645 ntBASIC22.08■■□□□ 1.13
SH3TC1Q8TE82 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC22.08■■□□□ 1.13
SH3TC1Q8TE82 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SH3TC1Q8TE82 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SH3TC1Q8TE82 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SH3TC1Q8TE82 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC22.08■■□□□ 1.13
SH3TC1Q8TE82 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC22.08■■□□□ 1.12
SH3TC1Q8TE82 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
SH3TC1Q8TE82 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
SH3TC1Q8TE82 AC100803.2-201ENST00000562459 1963 ntBASIC22.08■■□□□ 1.12
SH3TC1Q8TE82 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.12
SH3TC1Q8TE82 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
SH3TC1Q8TE82 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
SH3TC1Q8TE82 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
SH3TC1Q8TE82 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms