Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 AC090340.1-201ENST00000620778 4980 ntBASIC19.14■□□□□ 0.65
BEST2Q8NFU1 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
BEST2Q8NFU1 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.14■□□□□ 0.65
BEST2Q8NFU1 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
BEST2Q8NFU1 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.14■□□□□ 0.65
BEST2Q8NFU1 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BEST2Q8NFU1 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BEST2Q8NFU1 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BEST2Q8NFU1 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BEST2Q8NFU1 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BEST2Q8NFU1 COX5BP2-201ENST00000392354 334 ntBASIC19.14■□□□□ 0.65
BEST2Q8NFU1 DDX43P3-201ENST00000441064 443 ntBASIC19.14■□□□□ 0.65
BEST2Q8NFU1 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.14■□□□□ 0.65
BEST2Q8NFU1 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.14■□□□□ 0.65
BEST2Q8NFU1 AP002469.2-201ENST00000531724 424 ntBASIC19.14■□□□□ 0.65
BEST2Q8NFU1 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
BEST2Q8NFU1 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.14■□□□□ 0.65
BEST2Q8NFU1 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.14■□□□□ 0.65
BEST2Q8NFU1 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.14■□□□□ 0.65
BEST2Q8NFU1 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.14■□□□□ 0.65
BEST2Q8NFU1 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BEST2Q8NFU1 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
BEST2Q8NFU1 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
BEST2Q8NFU1 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
BEST2Q8NFU1 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.14■□□□□ 0.65
BEST2Q8NFU1 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
BEST2Q8NFU1 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
BEST2Q8NFU1 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BEST2Q8NFU1 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
BEST2Q8NFU1 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BEST2Q8NFU1 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
BEST2Q8NFU1 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
BEST2Q8NFU1 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BEST2Q8NFU1 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BEST2Q8NFU1 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
BEST2Q8NFU1 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BEST2Q8NFU1 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BEST2Q8NFU1 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.13■□□□□ 0.65
BEST2Q8NFU1 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BEST2Q8NFU1 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.13■□□□□ 0.65
BEST2Q8NFU1 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.13■□□□□ 0.65
BEST2Q8NFU1 AF238378.1-201ENST00000526806 358 ntBASIC19.13■□□□□ 0.65
BEST2Q8NFU1 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.13■□□□□ 0.65
BEST2Q8NFU1 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.13■□□□□ 0.65
BEST2Q8NFU1 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.13■□□□□ 0.65
BEST2Q8NFU1 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BEST2Q8NFU1 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BEST2Q8NFU1 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.13■□□□□ 0.65
BEST2Q8NFU1 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
BEST2Q8NFU1 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.13■□□□□ 0.65
BEST2Q8NFU1 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BEST2Q8NFU1 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BEST2Q8NFU1 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BEST2Q8NFU1 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.13■□□□□ 0.65
BEST2Q8NFU1 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BEST2Q8NFU1 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BEST2Q8NFU1 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BEST2Q8NFU1 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
BEST2Q8NFU1 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.13■□□□□ 0.65
BEST2Q8NFU1 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
BEST2Q8NFU1 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BEST2Q8NFU1 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BEST2Q8NFU1 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
BEST2Q8NFU1 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
BEST2Q8NFU1 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BEST2Q8NFU1 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
BEST2Q8NFU1 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BEST2Q8NFU1 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
BEST2Q8NFU1 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
BEST2Q8NFU1 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.12■□□□□ 0.65
BEST2Q8NFU1 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BEST2Q8NFU1 AC009949.1-201ENST00000623048 1830 ntBASIC19.12■□□□□ 0.65
BEST2Q8NFU1 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BEST2Q8NFU1 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
BEST2Q8NFU1 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
BEST2Q8NFU1 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
BEST2Q8NFU1 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BEST2Q8NFU1 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.12■□□□□ 0.65
BEST2Q8NFU1 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
BEST2Q8NFU1 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
BEST2Q8NFU1 RBM17P3-201ENST00000417687 1192 ntBASIC19.12■□□□□ 0.65
BEST2Q8NFU1 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.12■□□□□ 0.65
BEST2Q8NFU1 ABCD1P5-201ENST00000445663 754 ntBASIC19.12■□□□□ 0.65
BEST2Q8NFU1 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.12■□□□□ 0.65
BEST2Q8NFU1 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.12■□□□□ 0.65
BEST2Q8NFU1 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.12■□□□□ 0.65
BEST2Q8NFU1 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.12■□□□□ 0.65
BEST2Q8NFU1 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
BEST2Q8NFU1 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.12■□□□□ 0.65
BEST2Q8NFU1 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.12■□□□□ 0.65
BEST2Q8NFU1 SLC25A6P4-201ENST00000586535 553 ntBASIC19.12■□□□□ 0.65
BEST2Q8NFU1 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.12■□□□□ 0.65
BEST2Q8NFU1 AC008608.2-201ENST00000606089 416 ntBASIC19.12■□□□□ 0.65
BEST2Q8NFU1 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.12■□□□□ 0.65
BEST2Q8NFU1 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BEST2Q8NFU1 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
BEST2Q8NFU1 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
BEST2Q8NFU1 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.12■□□□□ 0.65
BEST2Q8NFU1 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.12■□□□□ 0.65
BEST2Q8NFU1 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms