Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 KRT18P60-201ENST00000312876 1297 ntBASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 MIR3181-201ENST00000578512 73 ntBASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 AC053503.5-201ENST00000601508 636 ntBASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC9.79□□□□□ -0.84
SPTSSBQ8NFR3 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 CCDC92-208ENST00000545135 4883 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 AC099489.1-203ENST00000598234 10568 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 FRMD6-AS1-201ENST00000617151 2229 ntBASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 AC141586.3-201ENST00000562166 1838 ntBASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 BEX3-202ENST00000372634 753 ntTSL 2 BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 HES6-204ENST00000409182 863 ntTSL 2 BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 AC006455.2-201ENST00000429931 906 ntBASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 U85056.1-201ENST00000616429 682 ntBASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 AL009178.2-201ENST00000597278 2719 ntBASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
SPTSSBQ8NFR3 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
SPTSSBQ8NFR3 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.84
SPTSSBQ8NFR3 AC131212.3-201ENST00000624087 4219 ntBASIC9.77□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms