Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.82■□□□□ 0.28
SIMC1Q8NDZ2 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
SIMC1Q8NDZ2 AL390719.2-201ENST00000606993 987 ntBASIC16.82■□□□□ 0.28
SIMC1Q8NDZ2 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.82■□□□□ 0.28
SIMC1Q8NDZ2 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.82■□□□□ 0.28
SIMC1Q8NDZ2 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIMC1Q8NDZ2 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SIMC1Q8NDZ2 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SIMC1Q8NDZ2 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIMC1Q8NDZ2 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SIMC1Q8NDZ2 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SIMC1Q8NDZ2 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIMC1Q8NDZ2 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SIMC1Q8NDZ2 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.82■□□□□ 0.28
SIMC1Q8NDZ2 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.81■□□□□ 0.28
SIMC1Q8NDZ2 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIMC1Q8NDZ2 AC134043.2-201ENST00000624206 2238 ntBASIC16.81■□□□□ 0.28
SIMC1Q8NDZ2 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SIMC1Q8NDZ2 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.81■□□□□ 0.28
SIMC1Q8NDZ2 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIMC1Q8NDZ2 AL353692.3-201ENST00000407031 1396 ntBASIC16.81■□□□□ 0.28
SIMC1Q8NDZ2 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIMC1Q8NDZ2 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.81■□□□□ 0.28
SIMC1Q8NDZ2 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SIMC1Q8NDZ2 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SIMC1Q8NDZ2 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SIMC1Q8NDZ2 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIMC1Q8NDZ2 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SIMC1Q8NDZ2 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIMC1Q8NDZ2 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIMC1Q8NDZ2 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SIMC1Q8NDZ2 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
SIMC1Q8NDZ2 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.81■□□□□ 0.28
SIMC1Q8NDZ2 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.81■□□□□ 0.28
SIMC1Q8NDZ2 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.81■□□□□ 0.28
SIMC1Q8NDZ2 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.81■□□□□ 0.28
SIMC1Q8NDZ2 GPR32P1-201ENST00000601788 811 ntBASIC16.81■□□□□ 0.28
SIMC1Q8NDZ2 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.81■□□□□ 0.28
SIMC1Q8NDZ2 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SIMC1Q8NDZ2 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SIMC1Q8NDZ2 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SIMC1Q8NDZ2 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIMC1Q8NDZ2 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SIMC1Q8NDZ2 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIMC1Q8NDZ2 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SIMC1Q8NDZ2 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIMC1Q8NDZ2 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SIMC1Q8NDZ2 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
SIMC1Q8NDZ2 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIMC1Q8NDZ2 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SIMC1Q8NDZ2 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
SIMC1Q8NDZ2 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SIMC1Q8NDZ2 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SIMC1Q8NDZ2 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIMC1Q8NDZ2 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIMC1Q8NDZ2 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SIMC1Q8NDZ2 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIMC1Q8NDZ2 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIMC1Q8NDZ2 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SIMC1Q8NDZ2 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
SIMC1Q8NDZ2 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIMC1Q8NDZ2 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SIMC1Q8NDZ2 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIMC1Q8NDZ2 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIMC1Q8NDZ2 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
SIMC1Q8NDZ2 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIMC1Q8NDZ2 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
SIMC1Q8NDZ2 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SIMC1Q8NDZ2 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIMC1Q8NDZ2 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SIMC1Q8NDZ2 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.8■□□□□ 0.28
SIMC1Q8NDZ2 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.8■□□□□ 0.28
SIMC1Q8NDZ2 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.8■□□□□ 0.28
SIMC1Q8NDZ2 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SIMC1Q8NDZ2 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.8■□□□□ 0.28
SIMC1Q8NDZ2 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.8■□□□□ 0.28
SIMC1Q8NDZ2 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.8■□□□□ 0.28
SIMC1Q8NDZ2 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
SIMC1Q8NDZ2 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
SIMC1Q8NDZ2 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SIMC1Q8NDZ2 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SIMC1Q8NDZ2 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.8■□□□□ 0.28
SIMC1Q8NDZ2 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SIMC1Q8NDZ2 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIMC1Q8NDZ2 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
SIMC1Q8NDZ2 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SIMC1Q8NDZ2 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIMC1Q8NDZ2 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.79■□□□□ 0.28
SIMC1Q8NDZ2 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SIMC1Q8NDZ2 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SIMC1Q8NDZ2 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SIMC1Q8NDZ2 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.79■□□□□ 0.28
SIMC1Q8NDZ2 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SIMC1Q8NDZ2 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SIMC1Q8NDZ2 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SIMC1Q8NDZ2 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SIMC1Q8NDZ2 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SIMC1Q8NDZ2 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SIMC1Q8NDZ2 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SIMC1Q8NDZ2 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms