Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
LINC00346Q8IVM7 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.81■□□□□ 0.12
LINC00346Q8IVM7 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LINC00346Q8IVM7 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LINC00346Q8IVM7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
LINC00346Q8IVM7 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.8■□□□□ 0.12
LINC00346Q8IVM7 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LINC00346Q8IVM7 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LINC00346Q8IVM7 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC00346Q8IVM7 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.8■□□□□ 0.12
LINC00346Q8IVM7 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
LINC00346Q8IVM7 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC00346Q8IVM7 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.8■□□□□ 0.12
LINC00346Q8IVM7 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC00346Q8IVM7 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC00346Q8IVM7 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.8■□□□□ 0.12
LINC00346Q8IVM7 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.8■□□□□ 0.12
LINC00346Q8IVM7 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
LINC00346Q8IVM7 AC012313.1-201ENST00000593393 3059 ntBASIC15.8■□□□□ 0.12
LINC00346Q8IVM7 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
LINC00346Q8IVM7 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC00346Q8IVM7 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC00346Q8IVM7 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC00346Q8IVM7 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.8■□□□□ 0.12
LINC00346Q8IVM7 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC00346Q8IVM7 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC00346Q8IVM7 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.8■□□□□ 0.12
LINC00346Q8IVM7 AC117947.1-201ENST00000427448 529 ntBASIC15.8■□□□□ 0.12
LINC00346Q8IVM7 BX664615.1-201ENST00000443558 458 ntBASIC15.8■□□□□ 0.12
LINC00346Q8IVM7 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
LINC00346Q8IVM7 AC092597.1-201ENST00000487352 616 ntBASIC15.8■□□□□ 0.12
LINC00346Q8IVM7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.8■□□□□ 0.12
LINC00346Q8IVM7 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.8■□□□□ 0.12
LINC00346Q8IVM7 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.8■□□□□ 0.12
LINC00346Q8IVM7 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.8■□□□□ 0.12
LINC00346Q8IVM7 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.8■□□□□ 0.12
LINC00346Q8IVM7 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
LINC00346Q8IVM7 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
LINC00346Q8IVM7 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
LINC00346Q8IVM7 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC15.8■□□□□ 0.12
LINC00346Q8IVM7 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LINC00346Q8IVM7 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC00346Q8IVM7 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC00346Q8IVM7 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LINC00346Q8IVM7 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC00346Q8IVM7 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LINC00346Q8IVM7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC00346Q8IVM7 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
LINC00346Q8IVM7 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC00346Q8IVM7 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LINC00346Q8IVM7 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.79■□□□□ 0.12
LINC00346Q8IVM7 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC00346Q8IVM7 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC00346Q8IVM7 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC00346Q8IVM7 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.79■□□□□ 0.12
LINC00346Q8IVM7 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC00346Q8IVM7 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.79■□□□□ 0.12
LINC00346Q8IVM7 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LINC00346Q8IVM7 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LINC00346Q8IVM7 AC113404.2-201ENST00000507884 177 ntBASIC15.79■□□□□ 0.12
LINC00346Q8IVM7 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.79■□□□□ 0.12
LINC00346Q8IVM7 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.79■□□□□ 0.12
LINC00346Q8IVM7 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LINC00346Q8IVM7 AC004263.2-201ENST00000617183 678 ntBASIC15.79■□□□□ 0.12
LINC00346Q8IVM7 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.79■□□□□ 0.12
LINC00346Q8IVM7 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LINC00346Q8IVM7 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.79■□□□□ 0.12
LINC00346Q8IVM7 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC00346Q8IVM7 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.79■□□□□ 0.12
LINC00346Q8IVM7 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LINC00346Q8IVM7 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC00346Q8IVM7 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
LINC00346Q8IVM7 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC00346Q8IVM7 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC00346Q8IVM7 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC00346Q8IVM7 AC141586.5-201ENST00000624546 2050 ntBASIC15.79■□□□□ 0.12
LINC00346Q8IVM7 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC00346Q8IVM7 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC00346Q8IVM7 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
LINC00346Q8IVM7 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
LINC00346Q8IVM7 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LINC00346Q8IVM7 AC009949.1-201ENST00000623048 1830 ntBASIC15.78■□□□□ 0.12
LINC00346Q8IVM7 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC00346Q8IVM7 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC00346Q8IVM7 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC00346Q8IVM7 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC00346Q8IVM7 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.78■□□□□ 0.12
LINC00346Q8IVM7 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC00346Q8IVM7 STARP1-201ENST00000397973 869 ntBASIC15.78■□□□□ 0.12
LINC00346Q8IVM7 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
LINC00346Q8IVM7 KRT18P48-201ENST00000434763 852 ntBASIC15.78■□□□□ 0.12
LINC00346Q8IVM7 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC15.78■□□□□ 0.12
LINC00346Q8IVM7 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.78■□□□□ 0.12
LINC00346Q8IVM7 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.78■□□□□ 0.12
LINC00346Q8IVM7 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
LINC00346Q8IVM7 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC00346Q8IVM7 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
LINC00346Q8IVM7 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.78■□□□□ 0.12
LINC00346Q8IVM7 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC00346Q8IVM7 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms