Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19■□□□□ 0.63
NPAS4Q8IUM7 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19■□□□□ 0.63
NPAS4Q8IUM7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19■□□□□ 0.63
NPAS4Q8IUM7 AC109462.3-201ENST00000573934 613 ntBASIC19■□□□□ 0.63
NPAS4Q8IUM7 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19■□□□□ 0.63
NPAS4Q8IUM7 AC092865.6-201ENST00000642101 219 ntBASIC19■□□□□ 0.63
NPAS4Q8IUM7 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19■□□□□ 0.63
NPAS4Q8IUM7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19■□□□□ 0.63
NPAS4Q8IUM7 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19■□□□□ 0.63
NPAS4Q8IUM7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19■□□□□ 0.63
NPAS4Q8IUM7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPAS4Q8IUM7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19■□□□□ 0.63
NPAS4Q8IUM7 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPAS4Q8IUM7 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPAS4Q8IUM7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.99■□□□□ 0.63
NPAS4Q8IUM7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.99■□□□□ 0.63
NPAS4Q8IUM7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS4Q8IUM7 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS4Q8IUM7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
NPAS4Q8IUM7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS4Q8IUM7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS4Q8IUM7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.99■□□□□ 0.63
NPAS4Q8IUM7 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS4Q8IUM7 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS4Q8IUM7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.99■□□□□ 0.63
NPAS4Q8IUM7 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS4Q8IUM7 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.99■□□□□ 0.63
NPAS4Q8IUM7 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.99■□□□□ 0.63
NPAS4Q8IUM7 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.99■□□□□ 0.63
NPAS4Q8IUM7 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.99■□□□□ 0.63
NPAS4Q8IUM7 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.99■□□□□ 0.63
NPAS4Q8IUM7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.99■□□□□ 0.63
NPAS4Q8IUM7 AL805961.1-202ENST00000641562 540 ntBASIC18.99■□□□□ 0.63
NPAS4Q8IUM7 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS4Q8IUM7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS4Q8IUM7 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS4Q8IUM7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS4Q8IUM7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS4Q8IUM7 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.99■□□□□ 0.63
NPAS4Q8IUM7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.99■□□□□ 0.63
NPAS4Q8IUM7 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS4Q8IUM7 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS4Q8IUM7 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS4Q8IUM7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.99■□□□□ 0.63
NPAS4Q8IUM7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.99■□□□□ 0.63
NPAS4Q8IUM7 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS4Q8IUM7 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.98■□□□□ 0.63
NPAS4Q8IUM7 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS4Q8IUM7 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.98■□□□□ 0.63
NPAS4Q8IUM7 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS4Q8IUM7 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.98■□□□□ 0.63
NPAS4Q8IUM7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS4Q8IUM7 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS4Q8IUM7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.98■□□□□ 0.63
NPAS4Q8IUM7 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS4Q8IUM7 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
NPAS4Q8IUM7 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.98■□□□□ 0.63
NPAS4Q8IUM7 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.98■□□□□ 0.63
NPAS4Q8IUM7 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.98■□□□□ 0.63
NPAS4Q8IUM7 ALG1L5P-201ENST00000482043 771 ntBASIC18.98■□□□□ 0.63
NPAS4Q8IUM7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.98■□□□□ 0.63
NPAS4Q8IUM7 AC018845.2-201ENST00000568326 409 ntBASIC18.98■□□□□ 0.63
NPAS4Q8IUM7 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.98■□□□□ 0.63
NPAS4Q8IUM7 STK25P1-201ENST00000585406 838 ntBASIC18.98■□□□□ 0.63
NPAS4Q8IUM7 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.98■□□□□ 0.63
NPAS4Q8IUM7 AL596442.2-201ENST00000610240 980 ntBASIC18.98■□□□□ 0.63
NPAS4Q8IUM7 AC004790.2-201ENST00000623588 572 ntBASIC18.98■□□□□ 0.63
NPAS4Q8IUM7 C20orf181-201ENST00000623918 480 ntBASIC18.98■□□□□ 0.63
NPAS4Q8IUM7 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
NPAS4Q8IUM7 BX276092.7-203ENST00000637198 1536 ntBASIC18.98■□□□□ 0.63
NPAS4Q8IUM7 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.98■□□□□ 0.63
NPAS4Q8IUM7 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS4Q8IUM7 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
NPAS4Q8IUM7 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS4Q8IUM7 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
NPAS4Q8IUM7 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS4Q8IUM7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS4Q8IUM7 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS4Q8IUM7 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS4Q8IUM7 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS4Q8IUM7 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS4Q8IUM7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.97■□□□□ 0.63
NPAS4Q8IUM7 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS4Q8IUM7 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.97■□□□□ 0.63
NPAS4Q8IUM7 DDX43P3-201ENST00000441064 443 ntBASIC18.97■□□□□ 0.63
NPAS4Q8IUM7 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS4Q8IUM7 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.97■□□□□ 0.63
NPAS4Q8IUM7 STK19B-204ENST00000512515 211 ntBASIC18.97■□□□□ 0.63
NPAS4Q8IUM7 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.97■□□□□ 0.63
NPAS4Q8IUM7 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
NPAS4Q8IUM7 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.97■□□□□ 0.63
NPAS4Q8IUM7 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
NPAS4Q8IUM7 MIR4469-201ENST00000583919 79 ntBASIC18.97■□□□□ 0.63
NPAS4Q8IUM7 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.97■□□□□ 0.63
NPAS4Q8IUM7 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.97■□□□□ 0.63
NPAS4Q8IUM7 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.97■□□□□ 0.63
NPAS4Q8IUM7 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.97■□□□□ 0.63
NPAS4Q8IUM7 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.97■□□□□ 0.63
NPAS4Q8IUM7 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS4Q8IUM7 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms