Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 AC009154.2-201ENST00000621177 724 ntBASIC17.81■□□□□ 0.44
LDB1Q86U70 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LDB1Q86U70 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
LDB1Q86U70 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LDB1Q86U70 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LDB1Q86U70 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LDB1Q86U70 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LDB1Q86U70 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.81■□□□□ 0.44
LDB1Q86U70 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.8■□□□□ 0.44
LDB1Q86U70 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LDB1Q86U70 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LDB1Q86U70 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LDB1Q86U70 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LDB1Q86U70 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
LDB1Q86U70 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LDB1Q86U70 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LDB1Q86U70 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.8■□□□□ 0.44
LDB1Q86U70 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LDB1Q86U70 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LDB1Q86U70 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
LDB1Q86U70 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LDB1Q86U70 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LDB1Q86U70 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LDB1Q86U70 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.8■□□□□ 0.44
LDB1Q86U70 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.8■□□□□ 0.44
LDB1Q86U70 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.8■□□□□ 0.44
LDB1Q86U70 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LDB1Q86U70 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.8■□□□□ 0.44
LDB1Q86U70 AC112698.1-201ENST00000510299 916 ntBASIC17.8■□□□□ 0.44
LDB1Q86U70 LINC01238-205ENST00000567549 1107 ntBASIC17.8■□□□□ 0.44
LDB1Q86U70 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LDB1Q86U70 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LDB1Q86U70 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
LDB1Q86U70 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
LDB1Q86U70 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LDB1Q86U70 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.8■□□□□ 0.44
LDB1Q86U70 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
LDB1Q86U70 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
LDB1Q86U70 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LDB1Q86U70 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LDB1Q86U70 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LDB1Q86U70 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.79■□□□□ 0.44
LDB1Q86U70 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LDB1Q86U70 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LDB1Q86U70 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
LDB1Q86U70 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LDB1Q86U70 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LDB1Q86U70 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.79■□□□□ 0.44
LDB1Q86U70 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
LDB1Q86U70 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LDB1Q86U70 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LDB1Q86U70 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LDB1Q86U70 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LDB1Q86U70 AL031133.1-201ENST00000406807 723 ntBASIC17.79■□□□□ 0.44
LDB1Q86U70 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.79■□□□□ 0.44
LDB1Q86U70 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.79■□□□□ 0.44
LDB1Q86U70 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.79■□□□□ 0.44
LDB1Q86U70 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.79■□□□□ 0.44
LDB1Q86U70 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.79■□□□□ 0.44
LDB1Q86U70 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.79■□□□□ 0.44
LDB1Q86U70 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LDB1Q86U70 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LDB1Q86U70 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.79■□□□□ 0.44
LDB1Q86U70 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LDB1Q86U70 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LDB1Q86U70 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.79■□□□□ 0.44
LDB1Q86U70 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.79■□□□□ 0.44
LDB1Q86U70 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.79■□□□□ 0.44
LDB1Q86U70 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
LDB1Q86U70 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
LDB1Q86U70 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LDB1Q86U70 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LDB1Q86U70 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LDB1Q86U70 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LDB1Q86U70 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LDB1Q86U70 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LDB1Q86U70 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LDB1Q86U70 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.78■□□□□ 0.44
LDB1Q86U70 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.78■□□□□ 0.44
LDB1Q86U70 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.78■□□□□ 0.44
LDB1Q86U70 AC068472.1-201ENST00000474589 881 ntBASIC17.78■□□□□ 0.44
LDB1Q86U70 AC139713.2-201ENST00000641328 2723 ntBASIC17.78■□□□□ 0.44
LDB1Q86U70 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
LDB1Q86U70 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
LDB1Q86U70 AC012313.1-201ENST00000593393 3059 ntBASIC17.78■□□□□ 0.44
LDB1Q86U70 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.78■□□□□ 0.44
LDB1Q86U70 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.78■□□□□ 0.44
LDB1Q86U70 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LDB1Q86U70 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LDB1Q86U70 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.78■□□□□ 0.44
LDB1Q86U70 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.78■□□□□ 0.44
LDB1Q86U70 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LDB1Q86U70 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
LDB1Q86U70 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.78■□□□□ 0.44
LDB1Q86U70 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LDB1Q86U70 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.78■□□□□ 0.44
LDB1Q86U70 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.77■□□□□ 0.44
LDB1Q86U70 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LDB1Q86U70 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
LDB1Q86U70 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms