Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
SCXQ7RTU7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
SCXQ7RTU7 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SCXQ7RTU7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
SCXQ7RTU7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC11.82□□□□□ -0.52
SCXQ7RTU7 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SCXQ7RTU7 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
SCXQ7RTU7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC11.81□□□□□ -0.52
SCXQ7RTU7 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SCXQ7RTU7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SCXQ7RTU7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
SCXQ7RTU7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SCXQ7RTU7 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
SCXQ7RTU7 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SCXQ7RTU7 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
SCXQ7RTU7 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
SCXQ7RTU7 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SCXQ7RTU7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
SCXQ7RTU7 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC11.81□□□□□ -0.52
SCXQ7RTU7 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SCXQ7RTU7 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SCXQ7RTU7 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SCXQ7RTU7 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SCXQ7RTU7 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
SCXQ7RTU7 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC11.81□□□□□ -0.52
SCXQ7RTU7 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SCXQ7RTU7 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SCXQ7RTU7 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SCXQ7RTU7 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
SCXQ7RTU7 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC11.81□□□□□ -0.52
SCXQ7RTU7 KRT18P23-201ENST00000435622 1283 ntBASIC11.81□□□□□ -0.52
SCXQ7RTU7 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC11.81□□□□□ -0.52
SCXQ7RTU7 TSSC2-201ENST00000450217 709 ntBASIC11.81□□□□□ -0.52
SCXQ7RTU7 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC11.81□□□□□ -0.52
SCXQ7RTU7 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SCXQ7RTU7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC11.81□□□□□ -0.52
SCXQ7RTU7 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC11.81□□□□□ -0.52
SCXQ7RTU7 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC11.81□□□□□ -0.52
SCXQ7RTU7 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC11.81□□□□□ -0.52
SCXQ7RTU7 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SCXQ7RTU7 AL121672.3-201ENST00000608644 468 ntBASIC11.81□□□□□ -0.52
SCXQ7RTU7 NPAP1P7-201ENST00000613027 823 ntBASIC11.81□□□□□ -0.52
SCXQ7RTU7 SPEG-225ENST00000617028 815 ntTSL 5 BASIC11.81□□□□□ -0.52
SCXQ7RTU7 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
SCXQ7RTU7 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SCXQ7RTU7 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
SCXQ7RTU7 CD276-203ENST00000537340 2439 ntTSL 2 BASIC11.81□□□□□ -0.52
SCXQ7RTU7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC11.81□□□□□ -0.52
SCXQ7RTU7 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
SCXQ7RTU7 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC11.81□□□□□ -0.52
SCXQ7RTU7 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC11.81□□□□□ -0.52
SCXQ7RTU7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SCXQ7RTU7 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC11.81□□□□□ -0.52
SCXQ7RTU7 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC11.81□□□□□ -0.52
SCXQ7RTU7 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SCXQ7RTU7 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SCXQ7RTU7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SCXQ7RTU7 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SCXQ7RTU7 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC11.81□□□□□ -0.52
SCXQ7RTU7 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SCXQ7RTU7 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
SCXQ7RTU7 AL139384.1-201ENST00000612143 3047 ntBASIC11.81□□□□□ -0.52
SCXQ7RTU7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC11.81□□□□□ -0.52
SCXQ7RTU7 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SCXQ7RTU7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SCXQ7RTU7 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC11.81□□□□□ -0.52
SCXQ7RTU7 AC009053.2-201ENST00000563701 2365 ntBASIC11.81□□□□□ -0.52
SCXQ7RTU7 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SCXQ7RTU7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SCXQ7RTU7 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
SCXQ7RTU7 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SCXQ7RTU7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC11.8□□□□□ -0.52
SCXQ7RTU7 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SCXQ7RTU7 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SCXQ7RTU7 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SCXQ7RTU7 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SCXQ7RTU7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
SCXQ7RTU7 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SCXQ7RTU7 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC11.8□□□□□ -0.52
SCXQ7RTU7 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SCXQ7RTU7 AL162741.1-201ENST00000565563 1558 ntBASIC11.8□□□□□ -0.52
SCXQ7RTU7 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SCXQ7RTU7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
SCXQ7RTU7 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SCXQ7RTU7 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SCXQ7RTU7 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SCXQ7RTU7 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SCXQ7RTU7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC11.8□□□□□ -0.52
SCXQ7RTU7 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SCXQ7RTU7 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
SCXQ7RTU7 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
SCXQ7RTU7 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SCXQ7RTU7 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SCXQ7RTU7 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC11.8□□□□□ -0.52
SCXQ7RTU7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC11.8□□□□□ -0.52
SCXQ7RTU7 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
SCXQ7RTU7 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC11.8□□□□□ -0.52
SCXQ7RTU7 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC11.8□□□□□ -0.52
SCXQ7RTU7 PRELID1P1-202ENST00000567272 903 ntBASIC11.8□□□□□ -0.52
SCXQ7RTU7 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms