Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.54■□□□□ 0.88
OTOP1Q7RTM1 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
OTOP1Q7RTM1 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.54■□□□□ 0.88
OTOP1Q7RTM1 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
OTOP1Q7RTM1 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
OTOP1Q7RTM1 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
OTOP1Q7RTM1 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.54■□□□□ 0.88
OTOP1Q7RTM1 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.54■□□□□ 0.88
OTOP1Q7RTM1 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.54■□□□□ 0.88
OTOP1Q7RTM1 AC136632.2-201ENST00000512891 861 ntBASIC20.54■□□□□ 0.88
OTOP1Q7RTM1 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.54■□□□□ 0.88
OTOP1Q7RTM1 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC20.54■□□□□ 0.88
OTOP1Q7RTM1 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC20.54■□□□□ 0.88
OTOP1Q7RTM1 AL022326.1-202ENST00000641533 845 ntBASIC20.54■□□□□ 0.88
OTOP1Q7RTM1 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
OTOP1Q7RTM1 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
OTOP1Q7RTM1 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
OTOP1Q7RTM1 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
OTOP1Q7RTM1 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
OTOP1Q7RTM1 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
OTOP1Q7RTM1 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.54■□□□□ 0.88
OTOP1Q7RTM1 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.53■□□□□ 0.88
OTOP1Q7RTM1 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
OTOP1Q7RTM1 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
OTOP1Q7RTM1 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
OTOP1Q7RTM1 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
OTOP1Q7RTM1 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.53■□□□□ 0.88
OTOP1Q7RTM1 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC20.53■□□□□ 0.88
OTOP1Q7RTM1 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
OTOP1Q7RTM1 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC20.53■□□□□ 0.88
OTOP1Q7RTM1 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
OTOP1Q7RTM1 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC20.53■□□□□ 0.88
OTOP1Q7RTM1 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
OTOP1Q7RTM1 AC138761.1-201ENST00000584393 385 ntBASIC20.53■□□□□ 0.88
OTOP1Q7RTM1 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
OTOP1Q7RTM1 AL513190.1-201ENST00000621254 727 ntBASIC20.53■□□□□ 0.88
OTOP1Q7RTM1 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.53■□□□□ 0.88
OTOP1Q7RTM1 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.53■□□□□ 0.88
OTOP1Q7RTM1 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.53■□□□□ 0.88
OTOP1Q7RTM1 GMCL1P1-201ENST00000463439 1581 ntBASIC20.53■□□□□ 0.88
OTOP1Q7RTM1 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
OTOP1Q7RTM1 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.53■□□□□ 0.88
OTOP1Q7RTM1 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
OTOP1Q7RTM1 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
OTOP1Q7RTM1 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.53■□□□□ 0.88
OTOP1Q7RTM1 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
OTOP1Q7RTM1 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
OTOP1Q7RTM1 ESPNP-201ENST00000270691 2015 ntBASIC20.53■□□□□ 0.88
OTOP1Q7RTM1 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
OTOP1Q7RTM1 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
OTOP1Q7RTM1 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
OTOP1Q7RTM1 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
OTOP1Q7RTM1 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.52■□□□□ 0.88
OTOP1Q7RTM1 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.52■□□□□ 0.88
OTOP1Q7RTM1 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
OTOP1Q7RTM1 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
OTOP1Q7RTM1 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
OTOP1Q7RTM1 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
OTOP1Q7RTM1 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
OTOP1Q7RTM1 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.52■□□□□ 0.88
OTOP1Q7RTM1 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.52■□□□□ 0.88
OTOP1Q7RTM1 TSEN15P1-201ENST00000423257 515 ntBASIC20.52■□□□□ 0.88
OTOP1Q7RTM1 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC20.52■□□□□ 0.88
OTOP1Q7RTM1 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC20.52■□□□□ 0.88
OTOP1Q7RTM1 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.52■□□□□ 0.88
OTOP1Q7RTM1 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
OTOP1Q7RTM1 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC20.52■□□□□ 0.88
OTOP1Q7RTM1 AC018845.2-201ENST00000568326 409 ntBASIC20.52■□□□□ 0.88
OTOP1Q7RTM1 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC20.52■□□□□ 0.88
OTOP1Q7RTM1 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
OTOP1Q7RTM1 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.52■□□□□ 0.88
OTOP1Q7RTM1 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
OTOP1Q7RTM1 AC079776.2-201ENST00000641154 1609 ntBASIC20.52■□□□□ 0.88
OTOP1Q7RTM1 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
OTOP1Q7RTM1 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.52■□□□□ 0.88
OTOP1Q7RTM1 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
OTOP1Q7RTM1 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
OTOP1Q7RTM1 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
OTOP1Q7RTM1 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
OTOP1Q7RTM1 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
OTOP1Q7RTM1 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
OTOP1Q7RTM1 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.51■□□□□ 0.87
OTOP1Q7RTM1 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
OTOP1Q7RTM1 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
OTOP1Q7RTM1 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
OTOP1Q7RTM1 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
OTOP1Q7RTM1 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
OTOP1Q7RTM1 CD99-202ENST00000381180 530 ntTSL 2 BASIC20.51■□□□□ 0.87
OTOP1Q7RTM1 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.51■□□□□ 0.87
OTOP1Q7RTM1 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC20.51■□□□□ 0.87
OTOP1Q7RTM1 CRYGEP-201ENST00000412192 528 ntBASIC20.51■□□□□ 0.87
OTOP1Q7RTM1 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.51■□□□□ 0.87
OTOP1Q7RTM1 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC20.51■□□□□ 0.87
OTOP1Q7RTM1 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.51■□□□□ 0.87
OTOP1Q7RTM1 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.51■□□□□ 0.87
OTOP1Q7RTM1 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC20.51■□□□□ 0.87
OTOP1Q7RTM1 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC20.51■□□□□ 0.87
OTOP1Q7RTM1 PUDP-206ENST00000540122 825 ntTSL 2 BASIC20.51■□□□□ 0.87
OTOP1Q7RTM1 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC20.51■□□□□ 0.87
OTOP1Q7RTM1 METTL23-205ENST00000588302 925 ntTSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms