Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.74□□□□□ -0.05
VPS13CQ709C8 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.74□□□□□ -0.05
VPS13CQ709C8 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS13CQ709C8 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS13CQ709C8 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC14.74□□□□□ -0.05
VPS13CQ709C8 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VPS13CQ709C8 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC14.74□□□□□ -0.05
VPS13CQ709C8 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS13CQ709C8 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
VPS13CQ709C8 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.74□□□□□ -0.05
VPS13CQ709C8 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS13CQ709C8 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VPS13CQ709C8 FAM58DP-201ENST00000428076 619 ntBASIC14.74□□□□□ -0.05
VPS13CQ709C8 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.74□□□□□ -0.05
VPS13CQ709C8 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.74□□□□□ -0.05
VPS13CQ709C8 RN7SL204P-201ENST00000582831 262 ntBASIC14.74□□□□□ -0.05
VPS13CQ709C8 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.74□□□□□ -0.05
VPS13CQ709C8 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VPS13CQ709C8 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
VPS13CQ709C8 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC14.74□□□□□ -0.05
VPS13CQ709C8 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.74□□□□□ -0.05
VPS13CQ709C8 AL096828.2-201ENST00000567259 1965 ntBASIC14.74□□□□□ -0.05
VPS13CQ709C8 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC14.74□□□□□ -0.05
VPS13CQ709C8 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS13CQ709C8 MEIS3P1-201ENST00000495167 958 ntBASIC14.74□□□□□ -0.05
VPS13CQ709C8 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.74□□□□□ -0.05
VPS13CQ709C8 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.74□□□□□ -0.05
VPS13CQ709C8 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
VPS13CQ709C8 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.74□□□□□ -0.05
VPS13CQ709C8 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.74□□□□□ -0.05
VPS13CQ709C8 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VPS13CQ709C8 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS13CQ709C8 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS13CQ709C8 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC14.73□□□□□ -0.05
VPS13CQ709C8 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS13CQ709C8 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC14.73□□□□□ -0.05
VPS13CQ709C8 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.73□□□□□ -0.05
VPS13CQ709C8 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.73□□□□□ -0.05
VPS13CQ709C8 BCAR1-209ENST00000546196 1340 ntBASIC14.73□□□□□ -0.05
VPS13CQ709C8 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS13CQ709C8 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VPS13CQ709C8 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS13CQ709C8 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS13CQ709C8 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS13CQ709C8 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VPS13CQ709C8 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS13CQ709C8 MRPS18AP1-201ENST00000414458 589 ntBASIC14.73□□□□□ -0.05
VPS13CQ709C8 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.73□□□□□ -0.05
VPS13CQ709C8 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.73□□□□□ -0.05
VPS13CQ709C8 AC005225.4-201ENST00000557330 545 ntBASIC14.73□□□□□ -0.05
VPS13CQ709C8 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.73□□□□□ -0.05
VPS13CQ709C8 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.73□□□□□ -0.05
VPS13CQ709C8 AC092902.6-201ENST00000641783 218 ntBASIC14.73□□□□□ -0.05
VPS13CQ709C8 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.73□□□□□ -0.05
VPS13CQ709C8 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
VPS13CQ709C8 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS13CQ709C8 SLC25A24-204ENST00000569674 2357 ntBASIC14.73□□□□□ -0.05
VPS13CQ709C8 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS13CQ709C8 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
VPS13CQ709C8 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS13CQ709C8 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
VPS13CQ709C8 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC14.73□□□□□ -0.05
VPS13CQ709C8 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
VPS13CQ709C8 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS13CQ709C8 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS13CQ709C8 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.73□□□□□ -0.05
VPS13CQ709C8 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.73□□□□□ -0.05
VPS13CQ709C8 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.73□□□□□ -0.05
VPS13CQ709C8 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.73□□□□□ -0.05
VPS13CQ709C8 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.73□□□□□ -0.05
VPS13CQ709C8 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.73□□□□□ -0.05
VPS13CQ709C8 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.73□□□□□ -0.05
VPS13CQ709C8 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.73□□□□□ -0.05
VPS13CQ709C8 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VPS13CQ709C8 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS13CQ709C8 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
VPS13CQ709C8 HLA-V-201ENST00000429037 534 ntBASIC14.72□□□□□ -0.05
VPS13CQ709C8 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VPS13CQ709C8 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC14.72□□□□□ -0.05
VPS13CQ709C8 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
VPS13CQ709C8 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS13CQ709C8 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC14.72□□□□□ -0.05
VPS13CQ709C8 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS13CQ709C8 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
VPS13CQ709C8 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS13CQ709C8 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS13CQ709C8 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS13CQ709C8 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
VPS13CQ709C8 AC005034.1-201ENST00000426657 489 ntBASIC14.72□□□□□ -0.05
VPS13CQ709C8 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.72□□□□□ -0.05
VPS13CQ709C8 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS13CQ709C8 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS13CQ709C8 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS13CQ709C8 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS13CQ709C8 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS13CQ709C8 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS13CQ709C8 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VPS13CQ709C8 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.72□□□□□ -0.05
VPS13CQ709C8 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VPS13CQ709C8 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms