Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VSTM1Q6UX27 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
VSTM1Q6UX27 NUS1P2-201ENST00000417358 873 ntBASIC18.96■□□□□ 0.63
VSTM1Q6UX27 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.96■□□□□ 0.63
VSTM1Q6UX27 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.96■□□□□ 0.63
VSTM1Q6UX27 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.96■□□□□ 0.63
VSTM1Q6UX27 DUTP2-201ENST00000519164 463 ntBASIC18.96■□□□□ 0.63
VSTM1Q6UX27 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.96■□□□□ 0.63
VSTM1Q6UX27 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.96■□□□□ 0.63
VSTM1Q6UX27 AC009533.2-201ENST00000543664 586 ntBASIC18.96■□□□□ 0.63
VSTM1Q6UX27 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.96■□□□□ 0.63
VSTM1Q6UX27 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.96■□□□□ 0.63
VSTM1Q6UX27 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
VSTM1Q6UX27 AC114341.1-201ENST00000618070 349 ntBASIC18.96■□□□□ 0.63
VSTM1Q6UX27 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
VSTM1Q6UX27 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.96■□□□□ 0.63
VSTM1Q6UX27 AC125634.1-201ENST00000438758 1403 ntBASIC18.96■□□□□ 0.63
VSTM1Q6UX27 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VSTM1Q6UX27 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VSTM1Q6UX27 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VSTM1Q6UX27 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
VSTM1Q6UX27 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
VSTM1Q6UX27 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.96■□□□□ 0.63
VSTM1Q6UX27 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VSTM1Q6UX27 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VSTM1Q6UX27 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
VSTM1Q6UX27 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.96■□□□□ 0.63
VSTM1Q6UX27 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
VSTM1Q6UX27 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
VSTM1Q6UX27 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VSTM1Q6UX27 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.95■□□□□ 0.62
VSTM1Q6UX27 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VSTM1Q6UX27 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
VSTM1Q6UX27 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VSTM1Q6UX27 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VSTM1Q6UX27 AC012313.1-201ENST00000593393 3059 ntBASIC18.95■□□□□ 0.62
VSTM1Q6UX27 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
VSTM1Q6UX27 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
VSTM1Q6UX27 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VSTM1Q6UX27 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
VSTM1Q6UX27 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.95■□□□□ 0.62
VSTM1Q6UX27 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
VSTM1Q6UX27 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.95■□□□□ 0.62
VSTM1Q6UX27 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.95■□□□□ 0.62
VSTM1Q6UX27 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.95■□□□□ 0.62
VSTM1Q6UX27 AC096582.2-201ENST00000510860 516 ntBASIC18.95■□□□□ 0.62
VSTM1Q6UX27 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VSTM1Q6UX27 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.95■□□□□ 0.62
VSTM1Q6UX27 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.95■□□□□ 0.62
VSTM1Q6UX27 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VSTM1Q6UX27 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.95■□□□□ 0.62
VSTM1Q6UX27 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.95■□□□□ 0.62
VSTM1Q6UX27 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VSTM1Q6UX27 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VSTM1Q6UX27 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VSTM1Q6UX27 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
VSTM1Q6UX27 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.94■□□□□ 0.62
VSTM1Q6UX27 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VSTM1Q6UX27 AC134043.2-201ENST00000624206 2238 ntBASIC18.94■□□□□ 0.62
VSTM1Q6UX27 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VSTM1Q6UX27 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VSTM1Q6UX27 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
VSTM1Q6UX27 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VSTM1Q6UX27 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VSTM1Q6UX27 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VSTM1Q6UX27 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
VSTM1Q6UX27 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
VSTM1Q6UX27 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.94■□□□□ 0.62
VSTM1Q6UX27 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.94■□□□□ 0.62
VSTM1Q6UX27 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.94■□□□□ 0.62
VSTM1Q6UX27 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.94■□□□□ 0.62
VSTM1Q6UX27 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.94■□□□□ 0.62
VSTM1Q6UX27 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
VSTM1Q6UX27 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.94■□□□□ 0.62
VSTM1Q6UX27 TP73-AS1-210ENST00000637775 1455 ntBASIC18.94■□□□□ 0.62
VSTM1Q6UX27 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VSTM1Q6UX27 AC093677.2-201ENST00000600169 1863 ntBASIC18.94■□□□□ 0.62
VSTM1Q6UX27 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VSTM1Q6UX27 AC022898.2-201ENST00000616822 1312 ntBASIC18.94■□□□□ 0.62
VSTM1Q6UX27 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.94■□□□□ 0.62
VSTM1Q6UX27 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VSTM1Q6UX27 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.94■□□□□ 0.62
VSTM1Q6UX27 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.94■□□□□ 0.62
VSTM1Q6UX27 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
VSTM1Q6UX27 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
VSTM1Q6UX27 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VSTM1Q6UX27 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
VSTM1Q6UX27 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VSTM1Q6UX27 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.93■□□□□ 0.62
VSTM1Q6UX27 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
VSTM1Q6UX27 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VSTM1Q6UX27 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VSTM1Q6UX27 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VSTM1Q6UX27 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
VSTM1Q6UX27 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.93■□□□□ 0.62
VSTM1Q6UX27 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
VSTM1Q6UX27 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VSTM1Q6UX27 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VSTM1Q6UX27 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VSTM1Q6UX27 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms