Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
LRFN4Q6PJG9 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRFN4Q6PJG9 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRFN4Q6PJG9 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRFN4Q6PJG9 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRFN4Q6PJG9 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRFN4Q6PJG9 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRFN4Q6PJG9 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRFN4Q6PJG9 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRFN4Q6PJG9 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRFN4Q6PJG9 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.08■□□□□ 0.16
LRFN4Q6PJG9 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRFN4Q6PJG9 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRFN4Q6PJG9 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRFN4Q6PJG9 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRFN4Q6PJG9 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.07■□□□□ 0.16
LRFN4Q6PJG9 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRFN4Q6PJG9 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.07■□□□□ 0.16
LRFN4Q6PJG9 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRFN4Q6PJG9 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRFN4Q6PJG9 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRFN4Q6PJG9 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
LRFN4Q6PJG9 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRFN4Q6PJG9 HLA-F-220ENST00000434407 884 ntBASIC16.07■□□□□ 0.16
LRFN4Q6PJG9 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRFN4Q6PJG9 HOMER2P1-201ENST00000455653 964 ntBASIC16.07■□□□□ 0.16
LRFN4Q6PJG9 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRFN4Q6PJG9 AL136038.4-201ENST00000603606 1261 ntBASIC16.07■□□□□ 0.16
LRFN4Q6PJG9 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRFN4Q6PJG9 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.07■□□□□ 0.16
LRFN4Q6PJG9 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRFN4Q6PJG9 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.07■□□□□ 0.16
LRFN4Q6PJG9 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.07■□□□□ 0.16
LRFN4Q6PJG9 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRFN4Q6PJG9 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRFN4Q6PJG9 FLJ13224-201ENST00000313737 1514 ntBASIC16.07■□□□□ 0.16
LRFN4Q6PJG9 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRFN4Q6PJG9 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
LRFN4Q6PJG9 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
LRFN4Q6PJG9 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRFN4Q6PJG9 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.07■□□□□ 0.16
LRFN4Q6PJG9 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.07■□□□□ 0.16
LRFN4Q6PJG9 GNAS-203ENST00000306120 1878 ntBASIC16.07■□□□□ 0.16
LRFN4Q6PJG9 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
LRFN4Q6PJG9 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRFN4Q6PJG9 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.07■□□□□ 0.16
LRFN4Q6PJG9 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
LRFN4Q6PJG9 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.07■□□□□ 0.16
LRFN4Q6PJG9 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
LRFN4Q6PJG9 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
LRFN4Q6PJG9 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRFN4Q6PJG9 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.06■□□□□ 0.16
LRFN4Q6PJG9 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.06■□□□□ 0.16
LRFN4Q6PJG9 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRFN4Q6PJG9 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.06■□□□□ 0.16
LRFN4Q6PJG9 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRFN4Q6PJG9 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRFN4Q6PJG9 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.06■□□□□ 0.16
LRFN4Q6PJG9 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRFN4Q6PJG9 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
LRFN4Q6PJG9 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
LRFN4Q6PJG9 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.06■□□□□ 0.16
LRFN4Q6PJG9 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRFN4Q6PJG9 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRFN4Q6PJG9 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRFN4Q6PJG9 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRFN4Q6PJG9 SLC25A6P5-201ENST00000435663 894 ntBASIC16.06■□□□□ 0.16
LRFN4Q6PJG9 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.06■□□□□ 0.16
LRFN4Q6PJG9 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRFN4Q6PJG9 AC063952.2-201ENST00000498792 1227 ntBASIC16.06■□□□□ 0.16
LRFN4Q6PJG9 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRFN4Q6PJG9 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.06■□□□□ 0.16
LRFN4Q6PJG9 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.06■□□□□ 0.16
LRFN4Q6PJG9 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
LRFN4Q6PJG9 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRFN4Q6PJG9 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.06■□□□□ 0.16
LRFN4Q6PJG9 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
LRFN4Q6PJG9 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.06■□□□□ 0.16
LRFN4Q6PJG9 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRFN4Q6PJG9 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRFN4Q6PJG9 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRFN4Q6PJG9 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRFN4Q6PJG9 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRFN4Q6PJG9 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRFN4Q6PJG9 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRFN4Q6PJG9 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRFN4Q6PJG9 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRFN4Q6PJG9 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRFN4Q6PJG9 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
LRFN4Q6PJG9 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRFN4Q6PJG9 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.05■□□□□ 0.16
LRFN4Q6PJG9 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LRFN4Q6PJG9 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRFN4Q6PJG9 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRFN4Q6PJG9 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRFN4Q6PJG9 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRFN4Q6PJG9 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRFN4Q6PJG9 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRFN4Q6PJG9 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.05■□□□□ 0.16
LRFN4Q6PJG9 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms