Protein–RNA interactions for Protein: Q6PJG6

BRAT1, BRCA1-associated ATM activator 1, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1Q6PJG6 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
BRAT1Q6PJG6 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
BRAT1Q6PJG6 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
BRAT1Q6PJG6 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
BRAT1Q6PJG6 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.83■□□□□ 0.44
BRAT1Q6PJG6 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
BRAT1Q6PJG6 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.83■□□□□ 0.44
BRAT1Q6PJG6 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
BRAT1Q6PJG6 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
BRAT1Q6PJG6 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
BRAT1Q6PJG6 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
BRAT1Q6PJG6 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
BRAT1Q6PJG6 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.82■□□□□ 0.44
BRAT1Q6PJG6 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.82■□□□□ 0.44
BRAT1Q6PJG6 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRAT1Q6PJG6 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
BRAT1Q6PJG6 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRAT1Q6PJG6 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
BRAT1Q6PJG6 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.82■□□□□ 0.44
BRAT1Q6PJG6 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRAT1Q6PJG6 RBM17P3-201ENST00000417687 1192 ntBASIC17.82■□□□□ 0.44
BRAT1Q6PJG6 SLC25A6P5-201ENST00000435663 894 ntBASIC17.82■□□□□ 0.44
BRAT1Q6PJG6 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRAT1Q6PJG6 EMBP1-201ENST00000458200 901 ntBASIC17.82■□□□□ 0.44
BRAT1Q6PJG6 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.82■□□□□ 0.44
BRAT1Q6PJG6 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.82■□□□□ 0.44
BRAT1Q6PJG6 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRAT1Q6PJG6 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
BRAT1Q6PJG6 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
BRAT1Q6PJG6 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.82■□□□□ 0.44
BRAT1Q6PJG6 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.82■□□□□ 0.44
BRAT1Q6PJG6 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.82■□□□□ 0.44
BRAT1Q6PJG6 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRAT1Q6PJG6 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
BRAT1Q6PJG6 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.82■□□□□ 0.44
BRAT1Q6PJG6 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.82■□□□□ 0.44
BRAT1Q6PJG6 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
BRAT1Q6PJG6 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRAT1Q6PJG6 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
BRAT1Q6PJG6 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
BRAT1Q6PJG6 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.82■□□□□ 0.44
BRAT1Q6PJG6 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.82■□□□□ 0.44
BRAT1Q6PJG6 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
BRAT1Q6PJG6 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRAT1Q6PJG6 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRAT1Q6PJG6 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BRAT1Q6PJG6 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.81■□□□□ 0.44
BRAT1Q6PJG6 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
BRAT1Q6PJG6 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRAT1Q6PJG6 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.81■□□□□ 0.44
BRAT1Q6PJG6 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BRAT1Q6PJG6 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.81■□□□□ 0.44
BRAT1Q6PJG6 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRAT1Q6PJG6 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
BRAT1Q6PJG6 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
BRAT1Q6PJG6 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BRAT1Q6PJG6 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRAT1Q6PJG6 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.81■□□□□ 0.44
BRAT1Q6PJG6 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRAT1Q6PJG6 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.81■□□□□ 0.44
BRAT1Q6PJG6 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.81■□□□□ 0.44
BRAT1Q6PJG6 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.81■□□□□ 0.44
BRAT1Q6PJG6 ABCD1P5-201ENST00000445663 754 ntBASIC17.81■□□□□ 0.44
BRAT1Q6PJG6 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.81■□□□□ 0.44
BRAT1Q6PJG6 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.81■□□□□ 0.44
BRAT1Q6PJG6 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BRAT1Q6PJG6 AC106795.1-205ENST00000512851 1056 ntBASIC17.81■□□□□ 0.44
BRAT1Q6PJG6 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.81■□□□□ 0.44
BRAT1Q6PJG6 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
BRAT1Q6PJG6 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BRAT1Q6PJG6 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRAT1Q6PJG6 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRAT1Q6PJG6 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.81■□□□□ 0.44
BRAT1Q6PJG6 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
BRAT1Q6PJG6 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRAT1Q6PJG6 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
BRAT1Q6PJG6 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRAT1Q6PJG6 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRAT1Q6PJG6 NEFHP1-201ENST00000412845 2629 ntBASIC17.81■□□□□ 0.44
BRAT1Q6PJG6 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
BRAT1Q6PJG6 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
BRAT1Q6PJG6 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.81■□□□□ 0.44
BRAT1Q6PJG6 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BRAT1Q6PJG6 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BRAT1Q6PJG6 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRAT1Q6PJG6 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
BRAT1Q6PJG6 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BRAT1Q6PJG6 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.8■□□□□ 0.44
BRAT1Q6PJG6 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRAT1Q6PJG6 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRAT1Q6PJG6 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRAT1Q6PJG6 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRAT1Q6PJG6 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.8■□□□□ 0.44
BRAT1Q6PJG6 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRAT1Q6PJG6 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRAT1Q6PJG6 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BRAT1Q6PJG6 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.8■□□□□ 0.44
BRAT1Q6PJG6 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
BRAT1Q6PJG6 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.8■□□□□ 0.44
BRAT1Q6PJG6 AKR1C7P-201ENST00000305623 895 ntBASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms