Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 Z98044.1-201ENST00000632503 1764 ntBASIC19.18■□□□□ 0.66
PRPF38BQ5VTL8 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRPF38BQ5VTL8 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
PRPF38BQ5VTL8 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
PRPF38BQ5VTL8 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PRPF38BQ5VTL8 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PRPF38BQ5VTL8 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
PRPF38BQ5VTL8 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRPF38BQ5VTL8 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRPF38BQ5VTL8 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRPF38BQ5VTL8 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRPF38BQ5VTL8 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRPF38BQ5VTL8 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.17■□□□□ 0.66
PRPF38BQ5VTL8 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRPF38BQ5VTL8 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRPF38BQ5VTL8 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.17■□□□□ 0.66
PRPF38BQ5VTL8 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRPF38BQ5VTL8 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRPF38BQ5VTL8 SLC25A24-204ENST00000569674 2357 ntBASIC19.17■□□□□ 0.66
PRPF38BQ5VTL8 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRPF38BQ5VTL8 MIR149-201ENST00000384879 89 ntBASIC19.17■□□□□ 0.66
PRPF38BQ5VTL8 AC011495.1-201ENST00000498085 584 ntBASIC19.17■□□□□ 0.66
PRPF38BQ5VTL8 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.17■□□□□ 0.66
PRPF38BQ5VTL8 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRPF38BQ5VTL8 AP005482.1-201ENST00000563722 1273 ntBASIC19.17■□□□□ 0.66
PRPF38BQ5VTL8 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.17■□□□□ 0.66
PRPF38BQ5VTL8 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC19.17■□□□□ 0.66
PRPF38BQ5VTL8 AC019129.2-201ENST00000609837 1235 ntBASIC19.17■□□□□ 0.66
PRPF38BQ5VTL8 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC19.17■□□□□ 0.66
PRPF38BQ5VTL8 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.17■□□□□ 0.66
PRPF38BQ5VTL8 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRPF38BQ5VTL8 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.17■□□□□ 0.66
PRPF38BQ5VTL8 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRPF38BQ5VTL8 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRPF38BQ5VTL8 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PRPF38BQ5VTL8 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRPF38BQ5VTL8 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRPF38BQ5VTL8 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PRPF38BQ5VTL8 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.16■□□□□ 0.66
PRPF38BQ5VTL8 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.16■□□□□ 0.66
PRPF38BQ5VTL8 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
PRPF38BQ5VTL8 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRPF38BQ5VTL8 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
PRPF38BQ5VTL8 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC19.16■□□□□ 0.66
PRPF38BQ5VTL8 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PRPF38BQ5VTL8 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
PRPF38BQ5VTL8 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRPF38BQ5VTL8 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
PRPF38BQ5VTL8 AL353779.1-201ENST00000434793 351 ntBASIC19.16■□□□□ 0.66
PRPF38BQ5VTL8 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC19.16■□□□□ 0.66
PRPF38BQ5VTL8 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PRPF38BQ5VTL8 AC104794.3-201ENST00000566840 1248 ntBASIC19.16■□□□□ 0.66
PRPF38BQ5VTL8 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRPF38BQ5VTL8 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC19.16■□□□□ 0.66
PRPF38BQ5VTL8 APOC4-201ENST00000591600 348 ntTSL 3 BASIC19.16■□□□□ 0.66
PRPF38BQ5VTL8 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.16■□□□□ 0.66
PRPF38BQ5VTL8 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRPF38BQ5VTL8 MIR6080-201ENST00000617359 66 ntBASIC19.16■□□□□ 0.66
PRPF38BQ5VTL8 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC19.16■□□□□ 0.66
PRPF38BQ5VTL8 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRPF38BQ5VTL8 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.16■□□□□ 0.66
PRPF38BQ5VTL8 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRPF38BQ5VTL8 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRPF38BQ5VTL8 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRPF38BQ5VTL8 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PRPF38BQ5VTL8 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRPF38BQ5VTL8 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.16■□□□□ 0.66
PRPF38BQ5VTL8 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.15■□□□□ 0.66
PRPF38BQ5VTL8 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PRPF38BQ5VTL8 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PRPF38BQ5VTL8 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PRPF38BQ5VTL8 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PRPF38BQ5VTL8 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.15■□□□□ 0.66
PRPF38BQ5VTL8 LINC00602-201ENST00000629776 2065 ntBASIC19.15■□□□□ 0.66
PRPF38BQ5VTL8 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.15■□□□□ 0.66
PRPF38BQ5VTL8 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRPF38BQ5VTL8 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PRPF38BQ5VTL8 PTCHD3P3-201ENST00000403073 906 ntBASIC19.15■□□□□ 0.66
PRPF38BQ5VTL8 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PRPF38BQ5VTL8 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRPF38BQ5VTL8 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.15■□□□□ 0.66
PRPF38BQ5VTL8 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.15■□□□□ 0.66
PRPF38BQ5VTL8 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC19.15■□□□□ 0.66
PRPF38BQ5VTL8 AC243562.1-201ENST00000560672 389 ntBASIC19.15■□□□□ 0.66
PRPF38BQ5VTL8 MIR6869-201ENST00000619434 62 ntBASIC19.15■□□□□ 0.66
PRPF38BQ5VTL8 COX11-210ENST00000639671 696 ntBASIC19.15■□□□□ 0.66
PRPF38BQ5VTL8 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRPF38BQ5VTL8 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.15■□□□□ 0.66
PRPF38BQ5VTL8 AC020907.1-201ENST00000616460 1350 ntBASIC19.15■□□□□ 0.66
PRPF38BQ5VTL8 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRPF38BQ5VTL8 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PRPF38BQ5VTL8 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PRPF38BQ5VTL8 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.15■□□□□ 0.66
PRPF38BQ5VTL8 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
PRPF38BQ5VTL8 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
PRPF38BQ5VTL8 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PRPF38BQ5VTL8 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.14■□□□□ 0.65
PRPF38BQ5VTL8 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRPF38BQ5VTL8 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.14■□□□□ 0.65
PRPF38BQ5VTL8 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms