Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC19.81■□□□□ 0.76
COL13A1Q5TAT6 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC19.81■□□□□ 0.76
COL13A1Q5TAT6 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC19.81■□□□□ 0.76
COL13A1Q5TAT6 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC19.81■□□□□ 0.76
COL13A1Q5TAT6 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL13A1Q5TAT6 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.81■□□□□ 0.76
COL13A1Q5TAT6 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC19.81■□□□□ 0.76
COL13A1Q5TAT6 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL13A1Q5TAT6 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
COL13A1Q5TAT6 PI4KAP1-204ENST00000612579 1703 ntBASIC19.81■□□□□ 0.76
COL13A1Q5TAT6 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL13A1Q5TAT6 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL13A1Q5TAT6 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
COL13A1Q5TAT6 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.81■□□□□ 0.76
COL13A1Q5TAT6 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL13A1Q5TAT6 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.81■□□□□ 0.76
COL13A1Q5TAT6 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL13A1Q5TAT6 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL13A1Q5TAT6 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL13A1Q5TAT6 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL13A1Q5TAT6 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL13A1Q5TAT6 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL13A1Q5TAT6 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL13A1Q5TAT6 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL13A1Q5TAT6 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
COL13A1Q5TAT6 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC19.8■□□□□ 0.76
COL13A1Q5TAT6 DFFBP1-201ENST00000433250 979 ntBASIC19.8■□□□□ 0.76
COL13A1Q5TAT6 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC19.8■□□□□ 0.76
COL13A1Q5TAT6 AL355994.2-201ENST00000447882 704 ntBASIC19.8■□□□□ 0.76
COL13A1Q5TAT6 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL13A1Q5TAT6 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC19.8■□□□□ 0.76
COL13A1Q5TAT6 LY6E-204ENST00000519546 971 ntTSL 2 BASIC19.8■□□□□ 0.76
COL13A1Q5TAT6 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
COL13A1Q5TAT6 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC19.8■□□□□ 0.76
COL13A1Q5TAT6 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC19.8■□□□□ 0.76
COL13A1Q5TAT6 MIR4706-201ENST00000582134 82 ntBASIC19.8■□□□□ 0.76
COL13A1Q5TAT6 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL13A1Q5TAT6 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC19.8■□□□□ 0.76
COL13A1Q5TAT6 SPDYE12P-201ENST00000618416 771 ntBASIC19.8■□□□□ 0.76
COL13A1Q5TAT6 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.8■□□□□ 0.76
COL13A1Q5TAT6 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL13A1Q5TAT6 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL13A1Q5TAT6 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.8■□□□□ 0.76
COL13A1Q5TAT6 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL13A1Q5TAT6 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL13A1Q5TAT6 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL13A1Q5TAT6 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.79■□□□□ 0.76
COL13A1Q5TAT6 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL13A1Q5TAT6 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL13A1Q5TAT6 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL13A1Q5TAT6 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL13A1Q5TAT6 AC132938.5-201ENST00000624980 1813 ntBASIC19.79■□□□□ 0.76
COL13A1Q5TAT6 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL13A1Q5TAT6 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL13A1Q5TAT6 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL13A1Q5TAT6 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL13A1Q5TAT6 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL13A1Q5TAT6 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL13A1Q5TAT6 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL13A1Q5TAT6 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.79■□□□□ 0.76
COL13A1Q5TAT6 AC087499.6-201ENST00000411576 835 ntBASIC19.79■□□□□ 0.76
COL13A1Q5TAT6 GPAA1P2-201ENST00000417923 928 ntBASIC19.79■□□□□ 0.76
COL13A1Q5TAT6 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
COL13A1Q5TAT6 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC19.79■□□□□ 0.76
COL13A1Q5TAT6 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC19.79■□□□□ 0.76
COL13A1Q5TAT6 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC19.79■□□□□ 0.76
COL13A1Q5TAT6 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC19.79■□□□□ 0.76
COL13A1Q5TAT6 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.79■□□□□ 0.76
COL13A1Q5TAT6 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.79■□□□□ 0.76
COL13A1Q5TAT6 MIR5572-201ENST00000583188 137 ntBASIC19.79■□□□□ 0.76
COL13A1Q5TAT6 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC19.79■□□□□ 0.76
COL13A1Q5TAT6 AL118558.3-201ENST00000607414 1079 ntBASIC19.79■□□□□ 0.76
COL13A1Q5TAT6 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
COL13A1Q5TAT6 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL13A1Q5TAT6 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL13A1Q5TAT6 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL13A1Q5TAT6 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL13A1Q5TAT6 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
COL13A1Q5TAT6 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
COL13A1Q5TAT6 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL13A1Q5TAT6 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL13A1Q5TAT6 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
COL13A1Q5TAT6 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL13A1Q5TAT6 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.79■□□□□ 0.76
COL13A1Q5TAT6 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.79■□□□□ 0.76
COL13A1Q5TAT6 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
COL13A1Q5TAT6 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.78■□□□□ 0.76
COL13A1Q5TAT6 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.78■□□□□ 0.76
COL13A1Q5TAT6 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL13A1Q5TAT6 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL13A1Q5TAT6 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.78■□□□□ 0.76
COL13A1Q5TAT6 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL13A1Q5TAT6 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL13A1Q5TAT6 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL13A1Q5TAT6 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.78■□□□□ 0.76
COL13A1Q5TAT6 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.78■□□□□ 0.76
COL13A1Q5TAT6 AC234644.1-201ENST00000406065 370 ntBASIC19.78■□□□□ 0.76
COL13A1Q5TAT6 MIR1247-201ENST00000408206 136 ntBASIC19.78■□□□□ 0.76
COL13A1Q5TAT6 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC19.78■□□□□ 0.76
COL13A1Q5TAT6 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms