Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.83■□□□□ 0.12
PCGF3Q3KNV8 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
PCGF3Q3KNV8 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
PCGF3Q3KNV8 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
PCGF3Q3KNV8 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15.83■□□□□ 0.12
PCGF3Q3KNV8 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.83■□□□□ 0.12
PCGF3Q3KNV8 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.83■□□□□ 0.12
PCGF3Q3KNV8 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCGF3Q3KNV8 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCGF3Q3KNV8 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.83■□□□□ 0.12
PCGF3Q3KNV8 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCGF3Q3KNV8 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.83■□□□□ 0.12
PCGF3Q3KNV8 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCGF3Q3KNV8 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCGF3Q3KNV8 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCGF3Q3KNV8 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCGF3Q3KNV8 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCGF3Q3KNV8 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCGF3Q3KNV8 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCGF3Q3KNV8 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.82■□□□□ 0.12
PCGF3Q3KNV8 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCGF3Q3KNV8 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.82■□□□□ 0.12
PCGF3Q3KNV8 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCGF3Q3KNV8 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCGF3Q3KNV8 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
PCGF3Q3KNV8 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCGF3Q3KNV8 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PCGF3Q3KNV8 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCGF3Q3KNV8 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.82■□□□□ 0.12
PCGF3Q3KNV8 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCGF3Q3KNV8 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCGF3Q3KNV8 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCGF3Q3KNV8 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.82■□□□□ 0.12
PCGF3Q3KNV8 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC15.82■□□□□ 0.12
PCGF3Q3KNV8 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.82■□□□□ 0.12
PCGF3Q3KNV8 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.82■□□□□ 0.12
PCGF3Q3KNV8 AC009065.1-201ENST00000564055 1225 ntBASIC15.82■□□□□ 0.12
PCGF3Q3KNV8 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.82■□□□□ 0.12
PCGF3Q3KNV8 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCGF3Q3KNV8 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCGF3Q3KNV8 TNRC18P3-201ENST00000441896 2691 ntBASIC15.82■□□□□ 0.12
PCGF3Q3KNV8 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.82■□□□□ 0.12
PCGF3Q3KNV8 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
PCGF3Q3KNV8 FLJ13224-201ENST00000313737 1514 ntBASIC15.82■□□□□ 0.12
PCGF3Q3KNV8 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCGF3Q3KNV8 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCGF3Q3KNV8 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCGF3Q3KNV8 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCGF3Q3KNV8 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCGF3Q3KNV8 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCGF3Q3KNV8 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.82■□□□□ 0.12
PCGF3Q3KNV8 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCGF3Q3KNV8 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCGF3Q3KNV8 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCGF3Q3KNV8 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
PCGF3Q3KNV8 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCGF3Q3KNV8 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCGF3Q3KNV8 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PCGF3Q3KNV8 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCGF3Q3KNV8 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCGF3Q3KNV8 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCGF3Q3KNV8 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCGF3Q3KNV8 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.81■□□□□ 0.12
PCGF3Q3KNV8 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCGF3Q3KNV8 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCGF3Q3KNV8 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCGF3Q3KNV8 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
PCGF3Q3KNV8 GUK1-204ENST00000366721 689 ntTSL 3 BASIC15.81■□□□□ 0.12
PCGF3Q3KNV8 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCGF3Q3KNV8 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.81■□□□□ 0.12
PCGF3Q3KNV8 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCGF3Q3KNV8 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCGF3Q3KNV8 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCGF3Q3KNV8 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCGF3Q3KNV8 AL359075.1-203ENST00000462729 1002 ntBASIC15.81■□□□□ 0.12
PCGF3Q3KNV8 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCGF3Q3KNV8 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCGF3Q3KNV8 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCGF3Q3KNV8 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PCGF3Q3KNV8 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PCGF3Q3KNV8 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCGF3Q3KNV8 AC024243.1-201ENST00000609234 778 ntBASIC15.81■□□□□ 0.12
PCGF3Q3KNV8 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCGF3Q3KNV8 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.81■□□□□ 0.12
PCGF3Q3KNV8 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.81■□□□□ 0.12
PCGF3Q3KNV8 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
PCGF3Q3KNV8 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCGF3Q3KNV8 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PCGF3Q3KNV8 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PCGF3Q3KNV8 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCGF3Q3KNV8 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCGF3Q3KNV8 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
PCGF3Q3KNV8 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCGF3Q3KNV8 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PCGF3Q3KNV8 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PCGF3Q3KNV8 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.8■□□□□ 0.12
PCGF3Q3KNV8 AD000864.1-201ENST00000624076 2295 ntBASIC15.8■□□□□ 0.12
PCGF3Q3KNV8 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCGF3Q3KNV8 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCGF3Q3KNV8 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms