Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.24■□□□□ 0.35
CACNA1EQ15878 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.24■□□□□ 0.35
CACNA1EQ15878 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CACNA1EQ15878 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.24■□□□□ 0.35
CACNA1EQ15878 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CACNA1EQ15878 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CACNA1EQ15878 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.23■□□□□ 0.35
CACNA1EQ15878 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
CACNA1EQ15878 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CACNA1EQ15878 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CACNA1EQ15878 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.23■□□□□ 0.35
CACNA1EQ15878 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CACNA1EQ15878 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CACNA1EQ15878 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CACNA1EQ15878 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.23■□□□□ 0.35
CACNA1EQ15878 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CACNA1EQ15878 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CACNA1EQ15878 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CACNA1EQ15878 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CACNA1EQ15878 OR7E47P-204ENST00000575924 449 ntBASIC17.23■□□□□ 0.35
CACNA1EQ15878 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.23■□□□□ 0.35
CACNA1EQ15878 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.23■□□□□ 0.35
CACNA1EQ15878 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CACNA1EQ15878 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.23■□□□□ 0.35
CACNA1EQ15878 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.23■□□□□ 0.35
CACNA1EQ15878 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CACNA1EQ15878 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CACNA1EQ15878 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CACNA1EQ15878 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CACNA1EQ15878 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CACNA1EQ15878 AC073592.3-201ENST00000625118 1834 ntBASIC17.23■□□□□ 0.35
CACNA1EQ15878 IGLL3P-201ENST00000412472 434 ntBASIC17.22■□□□□ 0.35
CACNA1EQ15878 COX20P2-201ENST00000452636 358 ntBASIC17.22■□□□□ 0.35
CACNA1EQ15878 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CACNA1EQ15878 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.22■□□□□ 0.35
CACNA1EQ15878 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CACNA1EQ15878 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CACNA1EQ15878 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CACNA1EQ15878 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CACNA1EQ15878 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CACNA1EQ15878 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CACNA1EQ15878 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CACNA1EQ15878 ACTG1P4-201ENST00000425123 1122 ntBASIC17.22■□□□□ 0.35
CACNA1EQ15878 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.22■□□□□ 0.35
CACNA1EQ15878 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.22■□□□□ 0.35
CACNA1EQ15878 RPS15P9-201ENST00000494093 319 ntBASIC17.22■□□□□ 0.35
CACNA1EQ15878 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.22■□□□□ 0.35
CACNA1EQ15878 AL031432.2-201ENST00000566714 459 ntBASIC17.22■□□□□ 0.35
CACNA1EQ15878 AL928711.1-201ENST00000570165 459 ntBASIC17.22■□□□□ 0.35
CACNA1EQ15878 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.22■□□□□ 0.35
CACNA1EQ15878 AC092902.6-201ENST00000641783 218 ntBASIC17.22■□□□□ 0.35
CACNA1EQ15878 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CACNA1EQ15878 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.22■□□□□ 0.35
CACNA1EQ15878 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
CACNA1EQ15878 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CACNA1EQ15878 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CACNA1EQ15878 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CACNA1EQ15878 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CACNA1EQ15878 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CACNA1EQ15878 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CACNA1EQ15878 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CACNA1EQ15878 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.22■□□□□ 0.35
CACNA1EQ15878 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.22■□□□□ 0.35
CACNA1EQ15878 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CACNA1EQ15878 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CACNA1EQ15878 AL031598.1-201ENST00000561511 1773 ntBASIC17.21■□□□□ 0.35
CACNA1EQ15878 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CACNA1EQ15878 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CACNA1EQ15878 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CACNA1EQ15878 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CACNA1EQ15878 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.21■□□□□ 0.35
CACNA1EQ15878 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.21■□□□□ 0.35
CACNA1EQ15878 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CACNA1EQ15878 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CACNA1EQ15878 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.21■□□□□ 0.35
CACNA1EQ15878 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CACNA1EQ15878 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CACNA1EQ15878 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CACNA1EQ15878 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CACNA1EQ15878 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CACNA1EQ15878 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CACNA1EQ15878 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CACNA1EQ15878 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CACNA1EQ15878 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.21■□□□□ 0.35
CACNA1EQ15878 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CACNA1EQ15878 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.21■□□□□ 0.35
CACNA1EQ15878 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.21■□□□□ 0.35
CACNA1EQ15878 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.21■□□□□ 0.35
CACNA1EQ15878 ACTG1P14-201ENST00000446382 1122 ntBASIC17.21■□□□□ 0.35
CACNA1EQ15878 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CACNA1EQ15878 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.21■□□□□ 0.35
CACNA1EQ15878 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.21■□□□□ 0.35
CACNA1EQ15878 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.21■□□□□ 0.35
CACNA1EQ15878 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.21■□□□□ 0.35
CACNA1EQ15878 AJ011932.1-201ENST00000621707 465 ntBASIC17.21■□□□□ 0.35
CACNA1EQ15878 AC004877.2-201ENST00000623941 599 ntBASIC17.21■□□□□ 0.35
CACNA1EQ15878 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.21■□□□□ 0.35
CACNA1EQ15878 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CACNA1EQ15878 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CACNA1EQ15878 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms