Protein–RNA interactions for Protein: P83105

HTRA4, Serine protease HTRA4, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA4P83105 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.8■□□□□ 0.6
HTRA4P83105 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.8■□□□□ 0.6
HTRA4P83105 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HTRA4P83105 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.8■□□□□ 0.6
HTRA4P83105 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HTRA4P83105 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.8■□□□□ 0.6
HTRA4P83105 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HTRA4P83105 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HTRA4P83105 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HTRA4P83105 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HTRA4P83105 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
HTRA4P83105 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.8■□□□□ 0.6
HTRA4P83105 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HTRA4P83105 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.8■□□□□ 0.6
HTRA4P83105 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.79■□□□□ 0.6
HTRA4P83105 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HTRA4P83105 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
HTRA4P83105 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HTRA4P83105 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.79■□□□□ 0.6
HTRA4P83105 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HTRA4P83105 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HTRA4P83105 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HTRA4P83105 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HTRA4P83105 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.79■□□□□ 0.6
HTRA4P83105 COX20P2-201ENST00000452636 358 ntBASIC18.79■□□□□ 0.6
HTRA4P83105 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.79■□□□□ 0.6
HTRA4P83105 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.79■□□□□ 0.6
HTRA4P83105 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HTRA4P83105 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.79■□□□□ 0.6
HTRA4P83105 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.79■□□□□ 0.6
HTRA4P83105 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.79■□□□□ 0.6
HTRA4P83105 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HTRA4P83105 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HTRA4P83105 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
HTRA4P83105 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HTRA4P83105 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HTRA4P83105 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.79■□□□□ 0.6
HTRA4P83105 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HTRA4P83105 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HTRA4P83105 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
HTRA4P83105 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
HTRA4P83105 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HTRA4P83105 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HTRA4P83105 AL121761.2-201ENST00000598007 1648 ntBASIC18.78■□□□□ 0.6
HTRA4P83105 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.78■□□□□ 0.6
HTRA4P83105 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HTRA4P83105 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HTRA4P83105 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.78■□□□□ 0.6
HTRA4P83105 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.78■□□□□ 0.6
HTRA4P83105 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HTRA4P83105 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
HTRA4P83105 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HTRA4P83105 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HTRA4P83105 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.78■□□□□ 0.6
HTRA4P83105 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HTRA4P83105 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.78■□□□□ 0.6
HTRA4P83105 AC004449.1-201ENST00000564240 433 ntBASIC18.78■□□□□ 0.6
HTRA4P83105 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.78■□□□□ 0.6
HTRA4P83105 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.78■□□□□ 0.6
HTRA4P83105 AC093512.1-201ENST00000617969 520 ntBASIC18.78■□□□□ 0.6
HTRA4P83105 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.78■□□□□ 0.6
HTRA4P83105 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HTRA4P83105 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.78■□□□□ 0.6
HTRA4P83105 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.78■□□□□ 0.6
HTRA4P83105 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HTRA4P83105 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HTRA4P83105 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HTRA4P83105 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.78■□□□□ 0.6
HTRA4P83105 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HTRA4P83105 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HTRA4P83105 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
HTRA4P83105 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.77■□□□□ 0.6
HTRA4P83105 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HTRA4P83105 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HTRA4P83105 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
HTRA4P83105 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
HTRA4P83105 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HTRA4P83105 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HTRA4P83105 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HTRA4P83105 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
HTRA4P83105 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.77■□□□□ 0.6
HTRA4P83105 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HTRA4P83105 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.77■□□□□ 0.6
HTRA4P83105 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.77■□□□□ 0.6
HTRA4P83105 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.77■□□□□ 0.6
HTRA4P83105 CXCL1P1-201ENST00000502804 216 ntBASIC18.77■□□□□ 0.6
HTRA4P83105 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.77■□□□□ 0.6
HTRA4P83105 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HTRA4P83105 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.77■□□□□ 0.6
HTRA4P83105 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HTRA4P83105 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.77■□□□□ 0.6
HTRA4P83105 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.77■□□□□ 0.6
HTRA4P83105 REXO1L3P-201ENST00000622202 1288 ntBASIC18.77■□□□□ 0.6
HTRA4P83105 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
HTRA4P83105 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HTRA4P83105 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
HTRA4P83105 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HTRA4P83105 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HTRA4P83105 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HTRA4P83105 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms