Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 AC116407.2-201ENST00000613639 860 ntBASIC15.68■□□□□ 0.1
UBE2NP61088 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.68■□□□□ 0.1
UBE2NP61088 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.68■□□□□ 0.1
UBE2NP61088 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2NP61088 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2NP61088 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.68■□□□□ 0.1
UBE2NP61088 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
UBE2NP61088 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
UBE2NP61088 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC15.68■□□□□ 0.1
UBE2NP61088 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2NP61088 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.68■□□□□ 0.1
UBE2NP61088 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
UBE2NP61088 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.68■□□□□ 0.1
UBE2NP61088 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2NP61088 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2NP61088 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.68■□□□□ 0.1
UBE2NP61088 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2NP61088 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
UBE2NP61088 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBE2NP61088 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBE2NP61088 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBE2NP61088 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBE2NP61088 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBE2NP61088 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBE2NP61088 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.67■□□□□ 0.1
UBE2NP61088 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBE2NP61088 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.67■□□□□ 0.1
UBE2NP61088 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBE2NP61088 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
UBE2NP61088 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBE2NP61088 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBE2NP61088 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC15.67■□□□□ 0.1
UBE2NP61088 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBE2NP61088 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBE2NP61088 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.67■□□□□ 0.1
UBE2NP61088 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
UBE2NP61088 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
UBE2NP61088 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
UBE2NP61088 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.67■□□□□ 0.1
UBE2NP61088 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.67■□□□□ 0.1
UBE2NP61088 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.67■□□□□ 0.1
UBE2NP61088 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
UBE2NP61088 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.67■□□□□ 0.1
UBE2NP61088 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBE2NP61088 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBE2NP61088 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBE2NP61088 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBE2NP61088 BICD1-207ENST00000551848 1962 ntBASIC15.67■□□□□ 0.1
UBE2NP61088 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBE2NP61088 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.67■□□□□ 0.1
UBE2NP61088 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBE2NP61088 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBE2NP61088 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.67■□□□□ 0.1
UBE2NP61088 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBE2NP61088 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.67■□□□□ 0.1
UBE2NP61088 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
UBE2NP61088 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBE2NP61088 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBE2NP61088 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
UBE2NP61088 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBE2NP61088 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBE2NP61088 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBE2NP61088 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.66■□□□□ 0.1
UBE2NP61088 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBE2NP61088 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBE2NP61088 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UBE2NP61088 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC15.66■□□□□ 0.1
UBE2NP61088 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.66■□□□□ 0.1
UBE2NP61088 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UBE2NP61088 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBE2NP61088 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.66■□□□□ 0.1
UBE2NP61088 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.66■□□□□ 0.1
UBE2NP61088 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.66■□□□□ 0.1
UBE2NP61088 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBE2NP61088 FLJ13224-201ENST00000313737 1514 ntBASIC15.66■□□□□ 0.1
UBE2NP61088 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBE2NP61088 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBE2NP61088 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.66■□□□□ 0.1
UBE2NP61088 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBE2NP61088 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.66■□□□□ 0.1
UBE2NP61088 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBE2NP61088 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.66■□□□□ 0.1
UBE2NP61088 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UBE2NP61088 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBE2NP61088 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UBE2NP61088 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.65■□□□□ 0.1
UBE2NP61088 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UBE2NP61088 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
UBE2NP61088 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
UBE2NP61088 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC15.65■□□□□ 0.1
UBE2NP61088 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.65■□□□□ 0.1
UBE2NP61088 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBE2NP61088 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBE2NP61088 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
UBE2NP61088 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBE2NP61088 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
UBE2NP61088 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBE2NP61088 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBE2NP61088 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
UBE2NP61088 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms