Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.54□□□□□ -0.08
SPCS3P61009 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SPCS3P61009 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SPCS3P61009 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SPCS3P61009 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
SPCS3P61009 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SPCS3P61009 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SPCS3P61009 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SPCS3P61009 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SPCS3P61009 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.53□□□□□ -0.08
SPCS3P61009 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
SPCS3P61009 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SPCS3P61009 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SPCS3P61009 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC14.53□□□□□ -0.08
SPCS3P61009 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
SPCS3P61009 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SPCS3P61009 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC14.53□□□□□ -0.08
SPCS3P61009 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SPCS3P61009 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
SPCS3P61009 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SPCS3P61009 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
SPCS3P61009 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SPCS3P61009 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SPCS3P61009 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SPCS3P61009 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SPCS3P61009 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SPCS3P61009 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SPCS3P61009 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SPCS3P61009 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SPCS3P61009 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC14.53□□□□□ -0.08
SPCS3P61009 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SPCS3P61009 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC14.53□□□□□ -0.08
SPCS3P61009 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SPCS3P61009 DUTP2-201ENST00000519164 463 ntBASIC14.53□□□□□ -0.08
SPCS3P61009 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC14.53□□□□□ -0.08
SPCS3P61009 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC14.53□□□□□ -0.08
SPCS3P61009 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC14.53□□□□□ -0.08
SPCS3P61009 WWOX-216ENST00000569818 525 ntBASIC14.53□□□□□ -0.08
SPCS3P61009 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC14.53□□□□□ -0.08
SPCS3P61009 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC14.53□□□□□ -0.08
SPCS3P61009 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SPCS3P61009 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
SPCS3P61009 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.53□□□□□ -0.08
SPCS3P61009 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SPCS3P61009 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SPCS3P61009 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SPCS3P61009 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SPCS3P61009 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SPCS3P61009 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SPCS3P61009 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SPCS3P61009 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.53□□□□□ -0.08
SPCS3P61009 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SPCS3P61009 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SPCS3P61009 PCDHA1-201ENST00000378133 2726 ntBASIC14.52□□□□□ -0.08
SPCS3P61009 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
SPCS3P61009 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC14.52□□□□□ -0.08
SPCS3P61009 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SPCS3P61009 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SPCS3P61009 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC14.52□□□□□ -0.08
SPCS3P61009 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SPCS3P61009 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SPCS3P61009 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.52□□□□□ -0.08
SPCS3P61009 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SPCS3P61009 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SPCS3P61009 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
SPCS3P61009 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC14.52□□□□□ -0.09
SPCS3P61009 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC14.52□□□□□ -0.09
SPCS3P61009 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC14.52□□□□□ -0.09
SPCS3P61009 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC14.52□□□□□ -0.09
SPCS3P61009 AP001412.1-201ENST00000608405 714 ntBASIC14.52□□□□□ -0.09
SPCS3P61009 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SPCS3P61009 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SPCS3P61009 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SPCS3P61009 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
SPCS3P61009 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SPCS3P61009 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
SPCS3P61009 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.52□□□□□ -0.09
SPCS3P61009 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.52□□□□□ -0.09
SPCS3P61009 AL024508.2-201ENST00000607749 1894 ntBASIC14.52□□□□□ -0.09
SPCS3P61009 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SPCS3P61009 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
SPCS3P61009 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SPCS3P61009 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SPCS3P61009 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SPCS3P61009 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC14.51□□□□□ -0.09
SPCS3P61009 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPCS3P61009 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPCS3P61009 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPCS3P61009 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPCS3P61009 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPCS3P61009 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.51□□□□□ -0.09
SPCS3P61009 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC14.51□□□□□ -0.09
SPCS3P61009 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.51□□□□□ -0.09
SPCS3P61009 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPCS3P61009 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC14.51□□□□□ -0.09
SPCS3P61009 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.51□□□□□ -0.09
SPCS3P61009 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SPCS3P61009 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
SPCS3P61009 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
SPCS3P61009 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms