Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VSX2P58304 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VSX2P58304 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.06■□□□□ 0.32
VSX2P58304 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VSX2P58304 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.06■□□□□ 0.32
VSX2P58304 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VSX2P58304 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VSX2P58304 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VSX2P58304 KRT8P47-201ENST00000604727 1398 ntBASIC17.06■□□□□ 0.32
VSX2P58304 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VSX2P58304 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VSX2P58304 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VSX2P58304 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VSX2P58304 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VSX2P58304 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.06■□□□□ 0.32
VSX2P58304 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.06■□□□□ 0.32
VSX2P58304 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
VSX2P58304 AC091304.2-201ENST00000564639 760 ntBASIC17.06■□□□□ 0.32
VSX2P58304 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VSX2P58304 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VSX2P58304 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VSX2P58304 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VSX2P58304 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VSX2P58304 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.06■□□□□ 0.32
VSX2P58304 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VSX2P58304 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
VSX2P58304 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
VSX2P58304 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VSX2P58304 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VSX2P58304 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.06■□□□□ 0.32
VSX2P58304 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
VSX2P58304 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VSX2P58304 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VSX2P58304 AC125634.1-201ENST00000438758 1403 ntBASIC17.05■□□□□ 0.32
VSX2P58304 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
VSX2P58304 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
VSX2P58304 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.05■□□□□ 0.32
VSX2P58304 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VSX2P58304 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VSX2P58304 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VSX2P58304 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VSX2P58304 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VSX2P58304 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.05■□□□□ 0.32
VSX2P58304 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
VSX2P58304 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
VSX2P58304 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VSX2P58304 TSPY19P-201ENST00000418461 509 ntBASIC17.05■□□□□ 0.32
VSX2P58304 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.05■□□□□ 0.32
VSX2P58304 TSPY18P-201ENST00000441642 509 ntBASIC17.05■□□□□ 0.32
VSX2P58304 KRT18P31-201ENST00000506277 1292 ntBASIC17.05■□□□□ 0.32
VSX2P58304 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.05■□□□□ 0.32
VSX2P58304 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.05■□□□□ 0.32
VSX2P58304 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.05■□□□□ 0.32
VSX2P58304 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.05■□□□□ 0.32
VSX2P58304 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.05■□□□□ 0.32
VSX2P58304 AL138831.2-201ENST00000606564 490 ntBASIC17.05■□□□□ 0.32
VSX2P58304 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.05■□□□□ 0.32
VSX2P58304 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.05■□□□□ 0.32
VSX2P58304 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VSX2P58304 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.05■□□□□ 0.32
VSX2P58304 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VSX2P58304 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
VSX2P58304 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
VSX2P58304 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VSX2P58304 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.05■□□□□ 0.32
VSX2P58304 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VSX2P58304 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.05■□□□□ 0.32
VSX2P58304 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VSX2P58304 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.05■□□□□ 0.32
VSX2P58304 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VSX2P58304 AC018470.1-201ENST00000624790 3129 ntBASIC17.05■□□□□ 0.32
VSX2P58304 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VSX2P58304 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VSX2P58304 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
VSX2P58304 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VSX2P58304 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VSX2P58304 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VSX2P58304 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.04■□□□□ 0.32
VSX2P58304 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.04■□□□□ 0.32
VSX2P58304 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
VSX2P58304 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
VSX2P58304 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
VSX2P58304 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VSX2P58304 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.04■□□□□ 0.32
VSX2P58304 AC135050.7-201ENST00000624508 2218 ntBASIC17.04■□□□□ 0.32
VSX2P58304 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VSX2P58304 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
VSX2P58304 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VSX2P58304 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VSX2P58304 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VSX2P58304 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
VSX2P58304 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VSX2P58304 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.04■□□□□ 0.32
VSX2P58304 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.04■□□□□ 0.32
VSX2P58304 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.04■□□□□ 0.32
VSX2P58304 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VSX2P58304 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.04■□□□□ 0.32
VSX2P58304 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.04■□□□□ 0.32
VSX2P58304 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.04■□□□□ 0.32
VSX2P58304 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms