Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.52■□□□□ 0.24
PER3P56645 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.52■□□□□ 0.24
PER3P56645 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.52■□□□□ 0.24
PER3P56645 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PER3P56645 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
PER3P56645 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
PER3P56645 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PER3P56645 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
PER3P56645 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PER3P56645 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PER3P56645 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PER3P56645 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.52■□□□□ 0.23
PER3P56645 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.51■□□□□ 0.23
PER3P56645 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.51■□□□□ 0.23
PER3P56645 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PER3P56645 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PER3P56645 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.51■□□□□ 0.23
PER3P56645 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PER3P56645 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PER3P56645 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PER3P56645 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.51■□□□□ 0.23
PER3P56645 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.51■□□□□ 0.23
PER3P56645 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.51■□□□□ 0.23
PER3P56645 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PER3P56645 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PER3P56645 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PER3P56645 MIR1233-2-201ENST00000408138 82 ntBASIC16.51■□□□□ 0.23
PER3P56645 MIR1233-1-201ENST00000408722 82 ntBASIC16.51■□□□□ 0.23
PER3P56645 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.51■□□□□ 0.23
PER3P56645 AC009065.1-201ENST00000564055 1225 ntBASIC16.51■□□□□ 0.23
PER3P56645 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.51■□□□□ 0.23
PER3P56645 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PER3P56645 REXO1L6P-202ENST00000619970 1078 ntBASIC16.51■□□□□ 0.23
PER3P56645 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
PER3P56645 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.51■□□□□ 0.23
PER3P56645 AF228730.7-201ENST00000641842 219 ntBASIC16.51■□□□□ 0.23
PER3P56645 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
PER3P56645 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PER3P56645 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PER3P56645 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PER3P56645 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PER3P56645 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.51■□□□□ 0.23
PER3P56645 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PER3P56645 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.51■□□□□ 0.23
PER3P56645 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PER3P56645 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PER3P56645 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PER3P56645 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.51■□□□□ 0.23
PER3P56645 AC006333.2-201ENST00000607957 2099 ntBASIC16.5■□□□□ 0.23
PER3P56645 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PER3P56645 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PER3P56645 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PER3P56645 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PER3P56645 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PER3P56645 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
PER3P56645 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PER3P56645 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PER3P56645 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PER3P56645 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.5■□□□□ 0.23
PER3P56645 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PER3P56645 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PER3P56645 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PER3P56645 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.5■□□□□ 0.23
PER3P56645 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.5■□□□□ 0.23
PER3P56645 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.5■□□□□ 0.23
PER3P56645 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PER3P56645 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PER3P56645 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PER3P56645 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PER3P56645 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.5■□□□□ 0.23
PER3P56645 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.5■□□□□ 0.23
PER3P56645 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PER3P56645 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PER3P56645 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PER3P56645 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.5■□□□□ 0.23
PER3P56645 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.5■□□□□ 0.23
PER3P56645 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PER3P56645 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
PER3P56645 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PER3P56645 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PER3P56645 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PER3P56645 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PER3P56645 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PER3P56645 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PER3P56645 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PER3P56645 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PER3P56645 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PER3P56645 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
PER3P56645 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PER3P56645 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PER3P56645 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.49■□□□□ 0.23
PER3P56645 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.49■□□□□ 0.23
PER3P56645 WIZP1-201ENST00000531444 2299 ntBASIC16.49■□□□□ 0.23
PER3P56645 IL9RP2-201ENST00000423948 1312 ntBASIC16.49■□□□□ 0.23
PER3P56645 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PER3P56645 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PER3P56645 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PER3P56645 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
PER3P56645 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PER3P56645 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms