Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.63■□□□□ 0.73
PEX3P56589 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PEX3P56589 RCN1P2-201ENST00000398357 915 ntBASIC19.63■□□□□ 0.73
PEX3P56589 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PEX3P56589 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.63■□□□□ 0.73
PEX3P56589 AL732292.2-201ENST00000609649 430 ntBASIC19.63■□□□□ 0.73
PEX3P56589 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.63■□□□□ 0.73
PEX3P56589 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
PEX3P56589 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PEX3P56589 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PEX3P56589 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
PEX3P56589 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PEX3P56589 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PEX3P56589 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PEX3P56589 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
PEX3P56589 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PEX3P56589 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.62■□□□□ 0.73
PEX3P56589 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PEX3P56589 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PEX3P56589 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
PEX3P56589 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PEX3P56589 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.62■□□□□ 0.73
PEX3P56589 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.62■□□□□ 0.73
PEX3P56589 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
PEX3P56589 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PEX3P56589 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.62■□□□□ 0.73
PEX3P56589 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PEX3P56589 TSPY19P-201ENST00000418461 509 ntBASIC19.62■□□□□ 0.73
PEX3P56589 TSPY18P-201ENST00000441642 509 ntBASIC19.62■□□□□ 0.73
PEX3P56589 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.62■□□□□ 0.73
PEX3P56589 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.62■□□□□ 0.73
PEX3P56589 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.62■□□□□ 0.73
PEX3P56589 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PEX3P56589 AL121772.3-201ENST00000610840 674 ntBASIC19.62■□□□□ 0.73
PEX3P56589 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PEX3P56589 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PEX3P56589 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.62■□□□□ 0.73
PEX3P56589 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PEX3P56589 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.62■□□□□ 0.73
PEX3P56589 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.62■□□□□ 0.73
PEX3P56589 AC012317.2-201ENST00000623305 2251 ntBASIC19.62■□□□□ 0.73
PEX3P56589 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PEX3P56589 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.61■□□□□ 0.73
PEX3P56589 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.61■□□□□ 0.73
PEX3P56589 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PEX3P56589 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
PEX3P56589 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.61■□□□□ 0.73
PEX3P56589 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PEX3P56589 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PEX3P56589 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PEX3P56589 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PEX3P56589 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
PEX3P56589 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.61■□□□□ 0.73
PEX3P56589 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PEX3P56589 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PEX3P56589 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.61■□□□□ 0.73
PEX3P56589 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.61■□□□□ 0.73
PEX3P56589 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.61■□□□□ 0.73
PEX3P56589 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.61■□□□□ 0.73
PEX3P56589 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.61■□□□□ 0.73
PEX3P56589 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.61■□□□□ 0.73
PEX3P56589 AC011467.2-201ENST00000598425 242 ntBASIC19.61■□□□□ 0.73
PEX3P56589 AC114341.1-201ENST00000618070 349 ntBASIC19.61■□□□□ 0.73
PEX3P56589 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
PEX3P56589 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.61■□□□□ 0.73
PEX3P56589 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PEX3P56589 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.61■□□□□ 0.73
PEX3P56589 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PEX3P56589 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.61■□□□□ 0.73
PEX3P56589 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PEX3P56589 AC008764.6-201ENST00000595909 2069 ntBASIC19.61■□□□□ 0.73
PEX3P56589 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PEX3P56589 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PEX3P56589 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.61■□□□□ 0.73
PEX3P56589 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PEX3P56589 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PEX3P56589 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
PEX3P56589 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PEX3P56589 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.6■□□□□ 0.73
PEX3P56589 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
PEX3P56589 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.6■□□□□ 0.73
PEX3P56589 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.6■□□□□ 0.73
PEX3P56589 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PEX3P56589 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PEX3P56589 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PEX3P56589 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.6■□□□□ 0.73
PEX3P56589 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PEX3P56589 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PEX3P56589 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
PEX3P56589 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PEX3P56589 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PEX3P56589 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PEX3P56589 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.6■□□□□ 0.73
PEX3P56589 KRT16P4-201ENST00000453883 522 ntBASIC19.6■□□□□ 0.73
PEX3P56589 KRT18P31-201ENST00000506277 1292 ntBASIC19.6■□□□□ 0.73
PEX3P56589 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PEX3P56589 AC091304.2-201ENST00000564639 760 ntBASIC19.6■□□□□ 0.73
PEX3P56589 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.6■□□□□ 0.73
PEX3P56589 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PEX3P56589 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms