Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.3■□□□□ 0.36
PDX1P52945 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.3■□□□□ 0.36
PDX1P52945 AC116407.3-201ENST00000623905 1129 ntBASIC17.3■□□□□ 0.36
PDX1P52945 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PDX1P52945 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDX1P52945 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDX1P52945 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDX1P52945 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDX1P52945 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDX1P52945 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.3■□□□□ 0.36
PDX1P52945 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.3■□□□□ 0.36
PDX1P52945 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PDX1P52945 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PDX1P52945 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PDX1P52945 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDX1P52945 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDX1P52945 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PDX1P52945 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.29■□□□□ 0.36
PDX1P52945 BICD1-207ENST00000551848 1962 ntBASIC17.29■□□□□ 0.36
PDX1P52945 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PDX1P52945 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDX1P52945 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDX1P52945 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDX1P52945 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDX1P52945 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.29■□□□□ 0.36
PDX1P52945 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
PDX1P52945 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PDX1P52945 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDX1P52945 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDX1P52945 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDX1P52945 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PDX1P52945 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.29■□□□□ 0.36
PDX1P52945 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDX1P52945 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PDX1P52945 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDX1P52945 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDX1P52945 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDX1P52945 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.29■□□□□ 0.36
PDX1P52945 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PDX1P52945 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.29■□□□□ 0.36
PDX1P52945 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.29■□□□□ 0.36
PDX1P52945 SART3-203ENST00000546611 1184 ntBASIC17.29■□□□□ 0.36
PDX1P52945 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.29■□□□□ 0.36
PDX1P52945 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.29■□□□□ 0.36
PDX1P52945 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.29■□□□□ 0.36
PDX1P52945 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDX1P52945 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.29■□□□□ 0.36
PDX1P52945 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.29■□□□□ 0.36
PDX1P52945 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.29■□□□□ 0.36
PDX1P52945 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.29■□□□□ 0.36
PDX1P52945 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PDX1P52945 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDX1P52945 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.29■□□□□ 0.36
PDX1P52945 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
PDX1P52945 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PDX1P52945 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PDX1P52945 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.29■□□□□ 0.36
PDX1P52945 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.29■□□□□ 0.36
PDX1P52945 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.28■□□□□ 0.36
PDX1P52945 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDX1P52945 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.28■□□□□ 0.36
PDX1P52945 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
PDX1P52945 AC090340.1-201ENST00000620778 4980 ntBASIC17.28■□□□□ 0.36
PDX1P52945 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDX1P52945 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDX1P52945 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDX1P52945 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDX1P52945 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDX1P52945 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDX1P52945 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PDX1P52945 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDX1P52945 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PDX1P52945 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDX1P52945 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PDX1P52945 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.28■□□□□ 0.36
PDX1P52945 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDX1P52945 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PDX1P52945 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.28■□□□□ 0.36
PDX1P52945 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDX1P52945 AC092865.5-201ENST00000545435 363 ntBASIC17.28■□□□□ 0.36
PDX1P52945 AC021087.4-201ENST00000563761 564 ntBASIC17.28■□□□□ 0.36
PDX1P52945 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PDX1P52945 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.28■□□□□ 0.36
PDX1P52945 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PDX1P52945 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.28■□□□□ 0.36
PDX1P52945 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDX1P52945 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDX1P52945 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.28■□□□□ 0.36
PDX1P52945 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDX1P52945 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
PDX1P52945 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PDX1P52945 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.28■□□□□ 0.36
PDX1P52945 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PDX1P52945 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PDX1P52945 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PDX1P52945 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PDX1P52945 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PDX1P52945 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDX1P52945 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.27■□□□□ 0.36
PDX1P52945 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms