Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
USP11P51784 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP11P51784 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.12■□□□□ 0.81
USP11P51784 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP11P51784 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP11P51784 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
USP11P51784 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP11P51784 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.12■□□□□ 0.81
USP11P51784 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.12■□□□□ 0.81
USP11P51784 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP11P51784 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.12■□□□□ 0.81
USP11P51784 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.12■□□□□ 0.81
USP11P51784 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP11P51784 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.12■□□□□ 0.81
USP11P51784 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP11P51784 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP11P51784 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
USP11P51784 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.12■□□□□ 0.81
USP11P51784 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP11P51784 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP11P51784 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
USP11P51784 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USP11P51784 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
USP11P51784 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.11■□□□□ 0.81
USP11P51784 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
USP11P51784 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
USP11P51784 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
USP11P51784 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
USP11P51784 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.11■□□□□ 0.81
USP11P51784 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.11■□□□□ 0.81
USP11P51784 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
USP11P51784 UNC93B7-201ENST00000509439 705 ntBASIC20.11■□□□□ 0.81
USP11P51784 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
USP11P51784 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.11■□□□□ 0.81
USP11P51784 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
USP11P51784 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
USP11P51784 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
USP11P51784 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
USP11P51784 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.11■□□□□ 0.81
USP11P51784 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
USP11P51784 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.11■□□□□ 0.81
USP11P51784 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.11■□□□□ 0.81
USP11P51784 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
USP11P51784 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
USP11P51784 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
USP11P51784 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.1■□□□□ 0.81
USP11P51784 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
USP11P51784 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.1■□□□□ 0.81
USP11P51784 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
USP11P51784 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.1■□□□□ 0.81
USP11P51784 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.1■□□□□ 0.81
USP11P51784 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
USP11P51784 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.1■□□□□ 0.81
USP11P51784 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
USP11P51784 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.1■□□□□ 0.81
USP11P51784 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.1■□□□□ 0.81
USP11P51784 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.1■□□□□ 0.81
USP11P51784 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
USP11P51784 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
USP11P51784 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.1■□□□□ 0.81
USP11P51784 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.1■□□□□ 0.81
USP11P51784 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.1■□□□□ 0.81
USP11P51784 LINC01711-201ENST00000598340 967 ntBASIC20.1■□□□□ 0.81
USP11P51784 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.1■□□□□ 0.81
USP11P51784 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.1■□□□□ 0.81
USP11P51784 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
USP11P51784 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
USP11P51784 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
USP11P51784 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.1■□□□□ 0.81
USP11P51784 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
USP11P51784 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.09■□□□□ 0.81
USP11P51784 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.09■□□□□ 0.81
USP11P51784 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
USP11P51784 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.09■□□□□ 0.81
USP11P51784 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
USP11P51784 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
USP11P51784 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
USP11P51784 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
USP11P51784 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
USP11P51784 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.09■□□□□ 0.81
USP11P51784 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.09■□□□□ 0.81
USP11P51784 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.09■□□□□ 0.81
USP11P51784 AC132008.2-207ENST00000454517 770 ntBASIC20.09■□□□□ 0.81
USP11P51784 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.09■□□□□ 0.81
USP11P51784 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
USP11P51784 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.09■□□□□ 0.81
USP11P51784 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.09■□□□□ 0.81
USP11P51784 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
USP11P51784 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.09■□□□□ 0.81
USP11P51784 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
USP11P51784 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.09■□□□□ 0.81
USP11P51784 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
USP11P51784 NOC2LP2-201ENST00000407594 1944 ntBASIC20.09■□□□□ 0.81
USP11P51784 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.09■□□□□ 0.81
USP11P51784 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.09■□□□□ 0.81
USP11P51784 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.09■□□□□ 0.81
USP11P51784 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
USP11P51784 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
USP11P51784 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
USP11P51784 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms